barSeed - Barley Seed Development Database

Probe ABC38397

Source Contig ABC38397

barSeed

barSeed Home
List Cluster Sets
List Cell Wall Probes

Links

James Hutton Institute Home
BioSS Home

Affymetrix Source Sequence (481 bp)

>ABC38397 481
TGCATCGAAGGCTATCCCCCAATTGATCTGCAGCTAGGGAAGCATGTTTTTCTTAGCGCT
GNCGATTTTTACCAGGCTAATCGCTCTTGATTCTTGTCTCTGAGATGTGCTGGCAAGGAT
GGAAGGGAGCTGGAATTGTCAAGTGTGTATTCAGAGATATACAGTGTATTACAGTGTGCT
CCCGTTTCTACACACTGCAAAGCTTGCCACACAAGTTTTGTGCTTTGTGTACATCAATTT
AGTGGACTTATGTTGAGTTTTCTCATATGGAAGTTTGACTACCCCCATTTGGTCCAAAAT
ATTAGGACACCAAAAACGCCCACACGTTTGTTATGGGCAGGTGCAGCCTGAATGGATCAC
CAATACAGGCCATGACAATTTTTTGCTTTTAATGATTGGGCTTGTATTAAGCACAGCAAA
AACTGGGCTTTTTGTTGTATTTAGCACAAAAACGACATGTACATAAAAAAAAAAAAAAAA
A

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_4966.4	3806	7e-63	3662 - 3804	97	139 / 143	CUST_17605_PI390587928 CUST_13604_PI390587928 CUST_16944_PI390587928	ABC09189 ABC38397