barSeed - Barley Seed Development Database

Probe ABC34542

Source Contig ABC34542

barSeed

Links

Affymetrix Source Sequence (757 bp)

>ABC34542 757
GCGCATTAAGTTGCAAATTTGGGATACAGCTGGTCAAGAGCGATTCAGGACTATCACGAC
AGCATACTACCGGGGAGCCATGGGAATCTTGCTTGTTTATGACGTCACGGATGAGTCATC
TTTCAACAACATACGGAACTGGATACGCAACATTGAGCAACATGCCTCTGATAATGTGAA
CAAAATTTTGATAGGCAACAAGGCTGATATGGATGAGAGTAAAAGGGCTGTTTCTACTGC
AAAGGGACAAGCACTAGCCGACGAATATGGCATCCAGTTCTTTGAAACTAGTGCGAAGAC
AAACCTTAACGTGGAGCAAGTTTTCTTTTCCATTGCCCTGGATATTAAGCAGAGACTTGC
TGAGACTGATTCCAAGCCTGAGGACCGGACGATCAAGATCAACAAGACAGAAGGTTCCGA
AAACCCAGAATCTCAGAAATCTGCTTGCTGTGGCTCATGAGGAATACGTCGACTTCACTC
TCATGGGCTATTTTAACTTTATCTGTTTACGGTCAGCTTGTTATTATAGGAACTGTAAGA
CTCGAGGAGATGACTATGTTGTGGTTGTTCTACTTGTGTTACCTTGTATTCTTTGCAGCA
GCAACTATTACTTTTAATGTAGTTTTGCAAGTTCTGTGTGTTATTGCATGATGTATTGCC
GTCGTGAGAACCATCCACTTTCTGCTGATGTAACTGCATTTTAGGTTTTCTATCTGTTCA
GTGCCATATTTGTGAAACTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_43828.1	996	0.0	303 - 996	99	691 / 694	None	ABC03334 ABC03335 ABC03337 ABC34542
MLOC_57578.2	1184	1e-132	383 - 792	88	359 / 410	CUST_9917_PI390587928	ABC03334 ABC03335 ABC03337 ABC34542
MLOC_57578.1	1143	6e-90	308 - 592	88	250 / 285	None	ABC03334 ABC03335 ABC03337 ABC34542