barSeed - Barley Seed Development Database

Probe ABC03335

Source Contig ABC03335

barSeed

Links

Affymetrix Source Sequence (1055 bp)

>ABC03335 1055
CCAACGCGCCGCTGCTCGCGCGGGGAGAGAGAAACAGACGAAGCCGAGATCGATCGAGCG
AACGCCGCCGCCGCATCGGAGCAAGCGCGCGAGCGAGCGAGCGACGCCGTCCCCGCCTCG
CTCGGCCCGGGAGTTAGGGCGCGATGGCGGCGCCGCCGGCCAGGGCTCGGGCCGACTACG
ACTACCTCATCAAGCTCCTCCTCATCGGCGACAGCGGTGTTGGAAAAAGTTGTCTGCTCC
TACGGTTCTCAGATGGCTCCTTCACCACTAGCTTCATCACCACTATTGGCATTGACTTCA
AGATAAGGACTGTTGAGTTGGATGGCAAGCGGATTAAGTTGCAGATCTGGGATACTGCTG
GCCAAGAACGCTTTCGGACTATAACTACTGCCTACTACAGGGGAGCCATGGGCATTTTAC
TTGTTTATGATGTCACGGACGAGTCGTCATTCAATAACATAAGAAATTGGATCAAAAACA
TTGAACAACATGCTTCAGATAACGTGAGCAAAATTTTGGTGGGGAACAAAGCGGATATGG
ATGAAAGCAAAAGGGCTGTTCCCACTTCAAAGGGCCAGGCCCTGGCCGATGAATACGGGA
TCCAGTTCTTTGAAACGAGTGCAAAGACAAACATGAATGTCGAGCAGGTTTTCTTCTCTA
TTGCAAGAGACATCAAGCAGAGACTCTCGGAGGCTGATTCCAAGCCTGAGGGGGGAACTA
TCAAGATCAACACGGAGGGTGATGCCAGTGCAGCAGCAGGACAGAAGTCGGCTTGCTGTG
GGTCTTGAACCGTGGTCGCCACGGGAAAAGAGATAGTTGCGACACGGTGCTTGTAATTCT
TGTCATTCCATTCTTTGTGTGCTGGTTTCGTTGTGTTATTTAAGTTATCGCTGTTGTTAG
GATCTGGACAAATTGGTGTTAAGTCAGAGCAATTACTTGCAGTATCGGTGGAAACTTTTT
GTTTTTGTTGAGATGAAACTCTGGTATATTCTGATGGCTGCTAAACGTTGGGAAGTTTTT
GGACCGCCTCTAAAAAAAAAAAAAAGTAAACTCGC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK353667	987	0.0	1 - 987	99	982 / 995	None	ABC03334 ABC03335 ABC03337
MLOC_45465.1	733	0.0	1 - 733	99	730 / 733	None	ABC03335
MLOC_43828.1	996	8e-160	113 - 706	84	498 / 594	None	ABC03334 ABC03335 ABC03337 ABC34542
MLOC_57578.2	1184	5e-142	194 - 782	82	484 / 589	CUST_9917_PI390587928	ABC03334 ABC03335 ABC03337 ABC34542
MLOC_57578.1	1143	3e-114	119 - 591	82	390 / 473	None	ABC03334 ABC03335 ABC03337 ABC34542
MLOC_53749.1	222	2e-75	53 - 221	97	164 / 169	None	ABC03335
MLOC_46952.1	237	1e-67	74 - 237	95	156 / 164	None	ABC03335