barSeed - Barley Seed Development Database

Probe ABC30266

Source Contig ABC30266

barSeed

Links

Affymetrix Source Sequence (578 bp)

>ABC30266 578
CTCCCACACCACCACAACATAAGCAACAGACCGGCGATCCACCACACCGCCACCTCAAGG
CCCGCCATGCCACAAACACCCCCCCAACACGGCCTCGCCTCAACCTCCAGATATGACCGC
CACCAGCATTTGTATTGGAAGTTCCTGATGTGGTCGTGGAGACGATGGGCCGCTCTTCCT
GATGCACCACGAGGGCAACGCCTACAGCTGCAAGTGGCGGCGTCGGCGGCGGGGGGCGGT
CGACCGGCGAGGCAAGTCCACGGCGTCCGTGCACCGGGCGGGCGCACGGTCACTACCGGA
GCATCTGCCGAACCGGTAGCCCGACCGACTGTGTAATGTTCTTGTAGGTTGACAACTTGT
CGCATCTCGAGCTTGTCTCATACAAGAGTGGAATGAAGTCCATTGTACTGTAGGGGAAGT
AGCAGATGTGCCATTGTTCTATTGTGAAATTATGTTCGTCCTTGCTATATTCCTGTGTAA
GGAAATGTCTTCAAGAGATGTTTTATTGTCTTATGTAAATCTGGGAAATGTATTATGTGA
TGTTATATGATGGATGATTTTAATTCGAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK368393	937	5e-174	90 - 420	100	331 / 331	None	ABC30266
MLOC_30091.1	267	3e-106	25 - 264	96	230 / 240	None	ABC30266
MLOC_30091.2	343	8e-93	24 - 239	95	206 / 216	None	ABC30266
AK360098	2805	3e-67	2569 - 2803	86	203 / 235	CUST_18057_PI390587928	ABC30266 ABC41013 ABC41313
AK355430	897	4e-61	677 - 894	86	189 / 219	None	ABC30266 ABC41013 ABC41313
AK373864	1116	1e-60	897 - 1116	86	194 / 226	CUST_7737_PI390587928	ABC02236 ABC30266 ABC41013