barSeed - Barley Seed Development Database

Probe ABC29300

Source Contig ABC29300

barSeed

Links

Affymetrix Source Sequence (474 bp)

>ABC29300 474
GCGAGCGGCCTCCCTCGGCAGCTACATGGGCACGGTGCTCGTGACGGCGGTGCAGAGCGC
CACGCGGGGCAGCGGCGACTGGCTCCAGGACAACATCAACCGGGGCAGGCTGGACGCCTA
CTACTGGCTCGTCACCTGCCTCATGGTGCTCAACCTTGGCTACTACCTCATCTGCTTCCA
TTTCTACACCATGAAGCCATTGGAGTTGGCGGAAGACGGTGACCACCACAAGGAGTGCGA
GCTGCCCTCCATCCACAAAAATGGCAACGGCGGCGCCGCCAGCGGCTTGGTATAAGAATA
AGATCGAGTAGTCGGAGGGTATAGTATAATTACGCAGTAGTCGGAGGGTATAGTATAATT
ACGCCGAATCTGGTTAGTAACTGTATACTGTAGTAAGTATATGGAGTACGTACTAACTAA
TTCAAGGACACATGCGTGCACAACCGTTGCAACTTCCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK355198	2276	1e-179	1642 - 2067	93	422 / 455	CUST_36698_PI390587928 CUST_40351_PI390587928 CUST_27801_PI390587928	ABC21251 ABC29300
MLOC_10689.1	3075	2e-173	379 - 708	100	330 / 330	CUST_40351_PI390587928 CUST_36698_PI390587928 CUST_27801_PI390587928	ABC21251 ABC29300
MLOC_10689.2	2133	2e-173	294 - 623	100	330 / 330	CUST_40351_PI390587928 CUST_36698_PI390587928 CUST_27801_PI390587928	ABC21251 ABC29300
MLOC_10689.3	2383	2e-173	285 - 614	100	330 / 330	CUST_40351_PI390587928 CUST_36698_PI390587928 CUST_27801_PI390587928	ABC21251 ABC29300