barSeed - Barley Seed Development Database

Probe ABC26649

Source Contig ABC26649

barSeed

Links

Affymetrix Source Sequence (522 bp)

>ABC26649 522
GGGGGGGTGGGGAAGACGACACTGGCAAGGGAGGTCTACCGCAAGATCCAAGGGCATTTT
CATTGTCAGGCTTTTGTCTCGGTCTCACAAAAGCCTAATGTAAAGAAAATTATGAAGGAT
TTGATCTGCCAGGTGCCTTGCAAGAAAGATTTTACCGAAGGTATCGACACTTGGGATGAA
ACAATATGTATTGCGAAACTAAAAAAGCTGTTACAAGATAAAAGGTATCTCATTGTTATT
GATGATATATGGTCCATATCAGCATGGGACGCTATTAAGTATGCTTTCCCGGAGAATGGA
TTTTCCAACAGGATTATAGCTACCACACGAGTTGTTGATGTAGCAAAATCATGTTCTCAT
GGTGGTAATGGCCGCATGTATGAAATGGAAGCCCTAAATGATCCCCACTCCAAACGATTG
TTCTTCAAAAGAATATTTGGTTCTGAGGACTGCTGCCCTGATATGCTAAAACAAGTTTCG
AATAAAATATTGAAGAAATGTGGAGGCCTCCCCCTCTCCCTC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK372820	3165	0.0	701 - 1205	99	503 / 505	CUST_17399_PI390587928	ABC26649
MLOC_79526.1	3481	0.0	2093 - 2597	98	495 / 505	CUST_28048_PI390587928	ABC18976 ABC26649
MLOC_67477.2	2663	6e-178	180 - 688	89	452 / 509	None	ABC26649
MLOC_67477.1	3320	6e-178	770 - 1278	89	452 / 509	None	ABC26649
AK360496	2831	6e-163	311 - 816	87	442 / 507	CUST_26230_PI390587928 CUST_12948_PI390587928 CUST_31159_PI390587928 CUST_4065_PI390587928	ABC18976 ABC26649