barSeed - Barley Seed Development Database

Probe ABC26356

Source Contig ABC26356

barSeed

Links

Affymetrix Source Sequence (580 bp)

>ABC26356 580
CGGGGAACATGCTCACCGGGTTCGGCTTCTACGAGCCCTTCTGGCTCATCGACTTCGCCA
ACATNTGCATCGTCGTGCACCTCATCGGTGCCTACCAGGTGTACTGCCAGCCCATATACG
CCGCCGTGGAGAGCTGGGATGCGGCACGGTGGCCGAGCTCAGAATTCGTCGTCCGCCGGT
ACCATCCTTTCGCCGCCGGCAAGTTCAGCGTCAACATGTTCAAGCTGGTGTGGAGAACGG
CGTTCGTCGTCGTAAGCACGGTCCTTGCCATCTCGTTGCCCTTCTTCAACGTCATCCTTG
GCCTCCTCGGCGCGCTCAGCTTCTGGCCGCTCACCGTGTACTTCCCAGTGGAGATGTACA
AACGACAGAGCAAAGTGGAGAGGTTTTCCAAGAAGTGGGTGGTGCTGCAGAGCCTGAGCT
TCATGTGCTTTGCGGTGACGGTGGCGGTGACCGTTGCCTCCGTGCAGGGGATCACCCAGT
CGCTCAAGAACTATGTGCCATTCAAGACGAAGCTGTGAATAAATATGTTACTTGAGAATA
AATTCACCAACTTATGTTTGCGCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_55054.1	1706	0.0	126 - 690	99	560 / 565	CUST_22956_PI390587928 CUST_25959_PI390587928	ABC14547 ABC26356
MLOC_7424.1	1556	3e-161	179 - 694	87	450 / 520	CUST_20191_PI390587928 CUST_6608_PI390587928	ABC14547 ABC26356
AK361903	1735	2e-159	1068 - 1583	86	449 / 520	CUST_20191_PI390587928 CUST_6608_PI390587928	ABC14547 ABC26356