barSeed - Barley Seed Development Database

Probe ABC26218

Source Contig ABC26218

barSeed

Links

Affymetrix Source Sequence (979 bp)

>ABC26218 979
GAGACTGGACATCTACTGGAGTTTATCTTTTCTATCGAAGGTCAAGATGAATCAAGCCCG
TTCTATTCTGTTCGCTTCATGCTTCCAATGCTATCACAAATAACGACGACAGCTGATGGA
TGTAGAACTTTGGTGTCATTTGGAGGCTATAAAGCAGTTATAGACTGCCTCATTAAAATG
ACCGAGGAGAATGGAATGATGATCGACGATGGTAGCATGTTTTTGGCATGTGATACTATC
ATAAACATCATGTCAAATGGGAAGAATTATCCTATTAAAATGGAGCCTTGTTTCATCCGC
CTCATGCAAGCACTTATTACATGGGCTGGAACAACAGATGCTTCATCAGTCATCATGACA
GCAGCCAGCTTATGCACAATGGTGATGGAGTTGACATCAGAAGAGTTTCTCTTGAGCTGC
TCAGGTTTTGACCCCAAGACCCTTGGGAGATTGTCTGACCTCATTGCCAGAAGCTTGCAT
CAGGATATCCCTGACGACGATAGTGAACAGCTTAACCAAAAGCAAATCATTGCATCAGGT
TATAGGCGCTGGGCTGATCGATTCCCGAGTGTTAGAAATGTCGTACATCAGCATGTATCT
GTCTGATCTTCTCTGCCCAAAGAGTTCTCTGTTGCGAATGTAGCCATACAGATGGGGAAC
CCATAGTGCAAGCATCCTGTTGCATCAGGTGTAATCTCATGCGGGGTTGCGTAACCCGTT
CCCCTCGCCGGCATCCACATGTAGCCGTCGGTGGCTGACTCGTTATTCTGTGTAACGGCC
GATGCCTTACTTGAACGCGCTGCTAGGGCAGGCAGGGTAGGGTTGCAAACATCACTTGAA
CCCTCAGTGGCTAGCTGGCATGGGTTTCTCACTACACTGGATTACATTAAGTGACAGGCT
GGCTGAGATGTTAGACCACATCTGTTTTCTCTGCCATTTTGTGTAAAACTAACTATTTTA
AGTGTAACAATACACATAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK373234	2414	0.0	1499 - 2414	100	916 / 916	None	ABC26218
MLOC_72752.1	527	0.0	2 - 445	98	434 / 445	CUST_12022_PI390587928	ABC26218
MLOC_72752.2	849	0.0	1 - 436	97	426 / 437	CUST_12022_PI390587928 CUST_32543_PI390587928	ABC26218
MLOC_56999.1	2053	6e-156	1 - 302	99	301 / 302	None	ABC26218
MLOC_56999.2	1775	6e-156	1 - 302	99	301 / 302	None	ABC26218
MLOC_56999.3	1731	2e-155	1 - 301	99	300 / 301	None	ABC26218
MLOC_56999.4	3054	7e-155	1 - 300	99	299 / 300	None	ABC26218
MLOC_43139.1	174	5e-72	16 - 172	98	154 / 157	None	ABC26218