barSeed - Barley Seed Development Database

Probe ABC26029

Source Contig ABC26029

barSeed

barSeed Home
List Cluster Sets
List Cell Wall Probes

Links

James Hutton Institute Home
BioSS Home

Affymetrix Source Sequence (539 bp)

>ABC26029 539
GCCCTTGGTCCGATTCGATTCGACCTGGGGTTGTAGGCGGCCTCCATATACAAGGACTGG
AGAGGAGGTTGACCAGGACCCCATGCCCATGACGCCGATTGCTCATCAAGGTCCCAACAC
AAGGAGAAGCGACCGCAGGTGCATCTTCAATCATTCCCAGCTCATATAGAATCCGCGGCA
GCAATAGCAGCAGATGCATCTATGAAGATGAGGAGGCAATGCCAAGCAGCAGCAACAGCA
ACTCAAGGTCCGGCCTCCTTGCGTGGCACCGAATGATGGATGTACGCCTAGTCTTCCCGG
CGATTTCGTTGTGAATCTGCAGCCACCGCTCGTTGTAGGAGAGTGACAGGAGAGTTACAG
GATTATTATTTTTAAAGAAGTTGGAAGTCCAAGTCAATGACTTGCTTTATATGTCTGTTG
TAATGTCAAATTTTCTGGGAATTTGGATGTATTGTTCATCTTGCTGAGAATTTTGTGTAT
ATTTGCTCGCTAAATTTATTAATCAAATGCTAGAATTCATGTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_17444.2	1045	0.0	51 - 577	99	526 / 527	CUST_12936_PI390587928	ABC26029
MLOC_17444.1	2227	2e-94	51 - 241	99	190 / 191	CUST_12936_PI390587928	ABC26029
MLOC_17445.1	2126	6e-74	1 - 151	100	151 / 151	None	ABC26029