barSeed - Barley Seed Development Database

Probe ABC25624

Source Contig ABC25624

barSeed

Links

Affymetrix Source Sequence (951 bp)

>ABC25624 951
GCGCCCGCGGCTACGCTGTAAACGCCACCGTCCGCGACCCATGTGATCCAAAGAATGCAT
GTCTCAAACAGCTAGATATGGCCCCGGAAAATCTCCAGTTGTTCAAGGCAGACATGCTTG
ACTACGACATGGTGGCAACTGCATTTGTCGGGTGTGAGGGTGTCTTCCATCTGGCCTCTC
CAGTTCCCATAGACAAGATGGTTGATAAAGAGATATGGTATGCTCTTGCCAAGATGGAAG
CTGAAGAGATGGCCCTAGAATACGCGGACAAAAATGGATTACACGTCGTTACATTTTGCT
CTGGTGCAGTCTTTGGCCCTCTGTTACAGGCTGATGTGCTCAATATCACCACCAAATTCC
TCCGCTATATCATAAAAGGAGGTCCTGACACAATAAATAACAAATTCTGGCCCATAGTAG
ACGTTCGCGATGTCGCTGACGCACTACTCCTGTTATACAACAAGGCAAAACCATGTCAGA
GGTACATATGTTCAGAACACCAAATCGACATAAAAGATTTGGTGGATTTGATGAAGAGCA
TGTACCCCAGCTATAACTATGTAGACAAGTAAGTCATATCAGCATACTTTCATATTTGCG
GTTATCGTTTCCACCGGATTTTCATCATTTTTGTTTTGTTTAGACTGGTTGAGGTGGATT
ATAAGGTCGGGATGAATTCAGATAAACTTAAGAATCTAGGATGGAAACCGAGGAAGTTGG
AGGAGACGCTTGCAGATAGCATCGAGTCATACGAGAAATCAGGAATCCTTAATGCGGAGG
AGGAACCGTGTCGCGTTCCTTATTTCTACCGCATGCCACCTGTTCTGGAGTGAATGGACA
CTGTTGTTCACCTACTGTTGTGGCATGGTTTCTGCATTTTGCTTGAAAGTTGAAACTTCA
CCGGATGTGTTTCTTAAAACGCAAATAAGACTCATACTTAACCATGTGTAT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK248951.1	1079	3e-159	691 - 999	99	308 / 309	CUST_22652_PI390587928	ABC02384 ABC25624
MLOC_40448.1	917	2e-140	1 - 271	100	271 / 271	None	ABC25624
MLOC_69462.1	345	1e-68	1 - 142	100	142 / 142	None	ABC25624