barSeed - Barley Seed Development Database

Probe ABC23974

Source Contig ABC23974

barSeed

Links

Affymetrix Source Sequence (715 bp)

>ABC23974 715
GCAGCTGCGCCGGTGGGCGAGAGAGGAGGGATGCCGTCGCTGCACTGCTGCGCCGACGCG
GACGCCGACCCCGCATCGTCCGTGGCCATGGCCGCCGCCGCTGACGACGACGACGACGAC
GCCGCGTCGCCCATCCTCACGCCGTCGTGGCGCCGACCGGAGAGGAGGCCAGAGCGCGCT
CACGCACGCCCGGCCAAGGCGGCAAATGGGGATCGCGCGTGCCTTGGCGTGCTCCGGACG
CGCTGCCCTTCCCGGGGAAGCACAACTCCGTCGGCCCGGAGTCCACGGTGCCCGAGCAGC
AGCAGCAATCGGCGCAGCAGAAGCCTTGAGCTGAAGGAGTCGTCTCCATGCTGTCCTCGA
TCGAGGTTACTTACATGCGGAACTACTTACTACGTACGTGCCTGTATGTAGGTCATACAT
CACATGGATGCTTGCTCGTATGGCTCCCATGGATACTCTAGCAGTAGCGCTTGCACTGGT
TCCGTGTGTGGATGGTGCATAGATGGCACTTGCAGGCGAGCATGCCAACTGCTTGATAAA
ATGCCCACTACATAGAGATAGAGAGAATGGAAGGAACAAGGAGATGAGGTGTGGTACGAT
GCTTGGCAAAACACAATAGTATTAAGTTGGGGAACGTTAAGTTGTAAATAACTGCTGAAA
TTATATTGCAGGTGGACTCTTGTCAATTTTTTTTGGTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_27170.1	510	1e-52	32 - 185	91	143 / 157	None	ABC23974
MLOC_30282.1	1542	6e-95	1264 - 1491	94	215 / 228	None	ABC23974 ABC25676
MLOC_75578.1	671	1e-52	265 - 403	94	131 / 139	None	ABC23974
AK371479	2437	1e-51	116 - 275	90	147 / 164	None	ABC07395 ABC23974