barSeed - Barley Seed Development Database

Probe ABC07395

Source Contig ABC07395

barSeed

Links

Affymetrix Source Sequence (1508 bp)

>ABC07395 1508
TCCCTCACCCCTCAGCTTCCCCAAGGCTACCTTTCCCCCCCGCACCCACACCCCAACAGC
ACAGCTTGCTCCGTGGTCAGGGTCTTCTTCTTGCTTGGCTTGGTAGCCGGGTCGCCTCTT
GCTTCCTCGAGCGCCTCTCCCCCTCGCCCAAGTCTCTCTCCGAACCATACCGGTCCCCGG
CAGCCGCAGGGGGTTTTCTCGGATTGCCGGAGAAGAGCCATGCTTCACGGCGGCCGGCCG
CTGTCCCTCAGGGGCTCCCTCAAGGCCCTCGAAGCCGATATCCACCACGCCAACACCCTG
GCGCATGCTATCCACAGGGCCTATGGCGGCACCTGCGTGCAGATGAGGCTGTCCTACAGC
TCCATGGCTCCAATCATCCTCAACCTTATCCAGTGGATGGACTGCAGCTGCTCCCTCTCC
TACACCCTCCCCAGCTACCTGGGCCTCCTGGAGGTTCTTGTCTACAAGGTTTATGTTGAT
GGGGATGCATCCATATCCACCATAGAAAGGCGAGCGAGCCTCAAAGAATTCTACGCCATA
ATATACCCCTACTTGCAACAAATTGAGGAGAACGTCATGGCGAAAGACTGCGGCAAGGAG
AAAGGGTGGTGCAAGGGGGACGGCGTCAGCGGCGGCCGGAAGCTTTACGCCGGTGACAAG
GACGCCGAGAGGGAAGATGAGTGCGGCATTTGCTTGGAGACCTGCACCAAGATGGTCCTT
CCCAACTGCAACCATGCCATGTGCATCAACTGTTACCGAGATTGGTACACAAGGTCTCAG
TCGTGCCCTTTCTGCCGCGGAAGCCTGAAGAGAGTCCAGTCCAGGGACCTGTGGGTGCTC
ACCGGCGACGACGACGTGATCGACCCCGTGACCCTGGAGAAGGAGAACGTGAGGCACTTC
CACAGCTTCATCGACAGCCTGCCCCTCATCGTCCCCGACAACCTCCTGCTGGTCTACTAT
GACTACCTAGTCTAGCGACGCTCCGGCTGGAAACAGGAGAGAGCGATGATGTACTTACAG
TACAAGGGTTCTCCGGCAGCCGACCATCCTCCGCAGATCGAGTCTGGCAAGCGAAGCCGG
GGCCGAAGCAGTCAGTCCGTTTGCCAAGCGCCATTATTTGTTGCTCTGGCTTTGCGCAAT
CGCATCGTTGTGGTAATAAGTGTACAGAAGAAGAAGTGTTTGATGGATCCCTGGTGAAGG
TTTTTACTTGTTTCGTATCGACGCTCTGGCAAATTGCCAAGCTATAATTAAAAAAGAACA
GGTGCTGGGTAATGAGTCAATCTGTGTGTGTGTCACCACAATTGGTAGAAAAAGAGCTCT
TCATGAATCTGCTACTGCTTCTTTCCTTTGTTGCGGGGGGAGTTATGTTGTGCAGCATAG
TTTTTATGGTACAAGTTCAAAATTTATGCACCACATCACATGTGGTACTCCCACTAAAAC
CACGACACTTATTATGGATTGGAGGGAGGATATAACAATACATCGGTTGTTAAAAAAAAA
AAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK251995.1	1340	0.0	14 - 1340	99	1325 / 1327	None	ABC07395
MLOC_52523.1	1772	0.0	1 - 933	99	930 / 933	None	ABC07395
MLOC_52523.2	1878	0.0	1 - 933	99	930 / 933	None	ABC07395
MLOC_52523.3	2038	0.0	1063 - 1831	99	767 / 769	None	ABC07395
MLOC_17289.1	644	0.0	2 - 644	100	643 / 643	None	ABC07395
MLOC_52523.4	736	7e-157	326 - 626	100	301 / 301	None	ABC07395
AK371479	2437	2e-93	2096 - 2300	97	199 / 205	None	ABC07395 ABC23974
MLOC_37300.1	194	2e-87	10 - 194	98	182 / 185	None	ABC07395
AK369388	2437	1e-80	2141 - 2334	95	184 / 194	None	ABC07395
MLOC_26493.2	1097	1e-80	679 - 872	95	184 / 194	None	ABC07395 ABC33409
MLOC_26493.1	385	1e-80	114 - 307	95	184 / 194	None	ABC07395
MLOC_75474.1	128	1e-55	1 - 128	98	125 / 128	None	ABC07395