barSeed - Barley Seed Development Database

Probe ABC23547

Source Contig ABC23547

barSeed

Links

Affymetrix Source Sequence (1035 bp)

>ABC23547 1035
CACGAGGCGCCTGTGGTCATGATGCGCACACAGCGATGCTCCTGGGAGCGGCAAAGCTGC
TGCATGAGCGCAAGGATCAGCTTAAGGGAACGGTGAGACTCCTTTTTCAACCTGCTGAGG
AGGGTGGTGCCGGTGCATCTCATATGGTAAAAGAAGGTGTTCTAGATGGTGTTGAGGCTA
TATTCGCCATGCATGTCGATTGTCAGAAGCCGACAGGCTCAATAGCTGCTCACGCAGGAC
CAACACATGCAGCCGTGTGTTTCTACGTAGTGAAAATAGAAGGTAAAACCGGGAAGGCTG
AAACACCACACTTGAATGTGGATCCTGTTGCTGCTGCGGCATTTACCATCCTGGCCCTGC
AACAGCTCACCTCGAGAGAAGACGACCCTCTTCACAGCCAAGTGCTCTCTGTTACCTATA
TTAAAGCTGGGAATTCTACTGATACCACACCTCCAGTTGTTGAATTCGGAGGTACTTTGA
GGAGCCTTACTACTGAAGGACTTTATCGACTAGAGAAAAGGCTTAAGGAGGTAGTAGAAG
GGCAGGCAGCTGTGCATAGATGCAAGGGGGTTACGGAGATACTGGGGGCTCCCTCCTACC
CGATGTATCCCGCCGTCGTGAATGATGAGAGGCTGCATCGCCACATAGAGAATGTGGGCA
GAAGATTGCTTGGCCCGGATAATGTGAAGCCCGGGGAGAAGATCATGGCAGGGGAAGACT
TTGCTTTCTACCAACAGTCAGTTCCTGGCGTCATCTTTGGTATCGGCATTAGAAACGAGA
AAGTCGGTGCGGTGCACTGTTATCACAACCCGCATTTCTTCGTGGACGAGGATGTCCTTC
CCATTGGAGCTGCGTTGCACACTGCTACTGCAGAAATGTATCTCTCTGGGTGCTCCACTC
AAAATGAAGTTGGAAGGGTGTGTTCACAGGAAGAGCAACTCTAGCGGATTCCATAAGAAG
AGAGTGTACAAAACATCTTAAAGGGCCTTTATTTTTTAAAGGCTCCAGAACAACCGGCAG
TGTCGATTACCACAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK362651	1447	0.0	389 - 1421	99	1027 / 1034	CUST_41942_PI390587928	ABC23547 ABC24266
MLOC_54858.4	2440	0.0	7 - 1038	99	1024 / 1033	None	ABC23547 ABC24266 ABC29139
MLOC_54858.3	2384	0.0	74 - 1105	99	1024 / 1033	CUST_41942_PI390587928	ABC23547 ABC24266 ABC29139
MLOC_54858.5	2357	0.0	1 - 941	99	938 / 941	None	ABC23547 ABC24266 ABC29139
MLOC_54858.2	2257	7e-66	904 - 1043	99	139 / 140	CUST_41942_PI390587928	ABC23547 ABC24266 ABC29139
MLOC_54194.2	2557	0.0	1237 - 2144	90	814 / 908	CUST_39921_PI390587928 CUST_22861_PI390587928 CUST_33075_PI390587928	ABC18508 ABC23547 ABC24266
MLOC_54858.1	2758	0.0	1149 - 1544	99	395 / 396	CUST_41942_PI390587928	ABC23547 ABC24266 ABC29139
MLOC_54194.1	2374	1e-58	1814 - 1961	95	140 / 148	CUST_39921_PI390587928 CUST_22861_PI390587928 CUST_33075_PI390587928	ABC18508 ABC23547 ABC24266