barSeed - Barley Seed Development Database

Probe ABC22503

Source Contig ABC22503

barSeed

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Affymetrix Source Sequence (874 bp)

>ABC22503 874
CGAGGAGTGGCTGCAGGGCTGCATGGAATCAAGAGGCTTATCTCAGATGGTACTAAGTGA
CATCGATTTGCATATGGCTGCTCTTGCATTGGAGTTGTGTTCCCAATAATGGTTGACAGA
AGATCCATTAAAAACGTCGGTTTAGCTGTGAGACATACAATTTTGCATGACACCCTTGTT
TTCATCAGGAGCGCTATGTTGCAAGGACAAGCAGTACAGATTGATGTTGGATTATCTATT
ATGGCAGTGACATCTATTTGCATATGGCTGCTCTTGCATTGGAGCTGTGTTCCACAATAA
TGGTTGACAGAAGATACATTAAAAACGTCATACAGTTTTGCATGACACCCTTGTTCTGAT
CAGGAGCGCTATGTTGCAAGGACAAGCAGTACAGCTTGAATGAGAGAGAGATAGAGGCAG
GTGCACCTGGACACGAGGAGATGTGACTAACACAGCCAACACAGTTTGGAAGTCCTCCGG
TGATGGATTCGGCAGCAGCAGATGGGTTGAAGGCCTCTGGCGATGGATGCGATAGTACGA
GGTGGAGCCGGCGAGGGATGCAACACCATGCGGGGCAAGGTCTGTACCGGCGAGGGATGC
AACACCACATGGGGCAAGGTGGTGCTCTGTAGTGGCGACAGAGGCAGCACCTCTGTAGCG
GCGTGGTGGTGCTCGGCGACAGAGGCAGCACCAAGCGCGGCAAGTCGTGCCCTGGTGAGC
CGTAGCTGCATGGAGGGTTTGGCTTGGAACTGCCAGGACGTGCGTGCGTTAGTGGATTTT
ACTGCATTTGTGTTGAACCGTTTTGCAATCAGCCGATGGCCGTATCTCTTCGGCTTGTTG
ACCGTCCGAGGTGGGGAACGGTTATTTAGTAAGA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK356033	1912	0.0	1016 - 1891	99	871 / 877	CUST_24993_PI390587928 CUST_4474_PI390587928	ABC04922 ABC16516 ABC22503
AK360284	2097	0.0	979 - 1694	99	713 / 716	CUST_4474_PI390587928	ABC04922 ABC16516 ABC22503
MLOC_80006.1	1921	0.0	676 - 1159	99	482 / 485	CUST_24993_PI390587928	ABC22503
MLOC_80006.2	1514	0.0	384 - 752	100	369 / 369	None	ABC22503
MLOC_80006.3	1357	6e-170	374 - 697	100	324 / 324	None	ABC22503
MLOC_41601.1	406	3e-93	212 - 404	99	191 / 193	None	ABC04922 ABC22503
MLOC_41601.2	207	7e-90	21 - 207	99	185 / 187	None	ABC04922 ABC22503
AK362832	4121	4e-57	2281 - 2447	91	152 / 167	CUST_9390_PI390587928	ABC04921 ABC04922 ABC04923 ABC22503
AK363191	3248	2e-55	1448 - 1614	90	151 / 167	None	ABC04922 ABC22503
MLOC_60837.1	158	2e-55	1 - 158	92	145 / 158	None	ABC04922 ABC22503