barSeed - Barley Seed Development Database

Probe ABC22479

Source Contig ABC22479

barSeed

Links

Affymetrix Source Sequence (978 bp)

>ABC22479 978
GAAGCCAGCCAGCATGACGGCGAAGGTGGCGGGCGGCCGGAAGCGCGGGGCGGAGGCCTT
CTTGGAGGAGGACCCCTTCGCGGCGCTCCCCCCGCCGCTGAACACGAAGAGGGGGCGATG
CTCGCCGTCTGCCGCCGCCGACGTGGCGGAGCTCGGGGTCAGCATGGACTTCGACCCCGT
CGATGCGCTCCAGCTCATCTTCCCCGGCGCCGATCCGCAGCTTCTTCGAGGCTATTTTGA
AGCATCGGGAAATGTGTTGGATGCTGCAATCAGAGGCTTCAAGGATCATTTGGCGTCTGG
TTCAGCACCGACCAATGCTGATGCGGCCTCATCTAGAGTGGCATCTGATGTGCCGGTGAC
GAAGATGAATAATGCGACAAACGTCACTGAATGGGCGGAGCTAATTGTCAAGGAGATGTC
AGCTGCTTCAGATTTGATCGACGCCAAGAATCGAGCCTCCAGGATACTCGAATTGTTCGA
CAAATCTGCCGCAAACTGCAACACTCCTGATGAAAAGCAGAAAATGCATGAGGAGCACAA
GATACTGAAGCAGATGCTGGGAGGCCTGCTTCACCAGAACGGCGTTCTGAAGAGGGCCTT
TCTTATCCAGCACAACAGGCTCAAGGACTACCAGGACATGGTGCAGGAACGGTCCCAGTT
CAAGGAGATCGTCGACAAGTACCAGCAGCAGATCAAGGCGCTAGAGGAGAGGAACTATGT
GCTGTCGTTGCATCTCGCGCAGTCGGATCACCGGAGTGGCATATCGGGGCACCGCAACCC
CGACGTCTTTTAGGGGTAGGCGGCTACTGCATCCTCCGTGAAACTTGGAAGGGAGAGTTT
GCCCTAGCCACCTAGAATTAGGTGAGGAAATGTGCCAAAAAAATATCATGGGATATTTAA
ATGTGTGATTTGTATTAAAAATGTTTAGTATGTATTTGAAGGCGTTTATCATTTTTTTTC
CAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_69163.1	1276	0.0	164 - 1128	99	963 / 965	CUST_18613_PI390587928	ABC22479
MLOC_79575.1	1428	2e-180	21 - 657	85	545 / 644	CUST_17172_PI390587928	ABC22479
MLOC_79575.2	1514	7e-160	613 - 1182	85	488 / 577	None	ABC22479
MLOC_79575.3	721	1e-132	1 - 486	84	416 / 493	None	ABC22479
MLOC_69159.1	406	6e-101	1 - 200	100	200 / 200	None	ABC22479
MLOC_79575.4	865	4e-73	270 - 533	86	226 / 264	None	ABC22479