barSeed - Barley Seed Development Database

Probe ABC22235

Source Contig ABC22235

barSeed

Links

Affymetrix Source Sequence (600 bp)

>ABC22235 600
GGCCAACGTGTCGCGGCGGGACGAGCCGGTGGCCGACGCGGCATGGAGGCTGGTGAAAGG
CTGGCTGTCCGACGACGAGGCGAGCAACAACGGGCTGCCGGGCAACGTGGGCGTCGCGGC
GGACCGTGTCGTCGGCGAGGAGATCGAGGGCAGGGGGTGGTCCGAAATGCTGCGGCTGGA
GGTGGACGACATGACCAAGCAGATATGCGGGGATGTCCTGGGCGAGGTCGTTGAGGAGGC
GCTTTCGGAATTCCCCCGGGTACCGTTGATGGATGCTCCTTGAATTCTTCTGCCCTGCTC
GCTCGTGGTGTCCACCGGTGGCTTTTATTTTCCGATCTGGTGGAGACCGTTTGCTGAGGC
CCCGGCGCTCGGCTCCTTGCGTGTGTGTGTGTGTGTGTGTATACTCCGTCCGTAGTCCCC
CTCTTGACTGTTGTCCTGTCTGCTCCAGTCAAGTGTGCGTGCGTGCGTGCCCACTCCCTC
TCTCTGTCACGCCACATGCCGTCACAGTTGATACGTACATTCTATTCTACACTAATAATG
ATCATGAAATGAATGAGCGAGTGAATGAATGAATACAGCTGCGTTTCAGCNNAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_64767.1	3610	46 - 634	100	589 / 589	CUST_12315_PI390587928 CUST_16770_PI390587928 CUST_26709_PI390587928 CUST_10983_PI390587928	ABC22235
MLOC_64767.2	3163	46 - 634	100	589 / 589	CUST_12315_PI390587928 CUST_16770_PI390587928 CUST_26709_PI390587928 CUST_10983_PI390587928	ABC22235
MLOC_64767.3	3120	1 - 589	100	589 / 589	CUST_12315_PI390587928 CUST_16770_PI390587928 CUST_26709_PI390587928 CUST_10983_PI390587928	ABC22235
AK370334	2412	1840 - 2412	100	573 / 573	CUST_12315_PI390587928 CUST_16770_PI390587928 CUST_26709_PI390587928 CUST_10983_PI390587928	ABC22235
AK364175	3392	2823 - 3392	100	570 / 570	CUST_12315_PI390587928 CUST_16770_PI390587928 CUST_26709_PI390587928 CUST_10983_PI390587928	ABC03031 ABC22235
MLOC_64767.4	3731	1 - 569	100	569 / 569	CUST_12315_PI390587928 CUST_16770_PI390587928 CUST_26709_PI390587928 CUST_10983_PI390587928	ABC22235