barSeed - Barley Seed Development Database

Probe ABC22018

Source Contig ABC22018

barSeed

Links

Affymetrix Source Sequence (559 bp)

>ABC22018 559
ACTTCCATACTATTGTCGTTGGTTCAACATCCACGACTGCACCACTTTACAGGGAGTGCA
TACATCCTAAGATTCCACAACTTGCGGTCATCGGATATTCTGATAACTATGCGAATGTCT
ACACTTCAGAATTACGGTCTAAGTGGTTAGCATATTTCATGGATGGTGGATTTAGATTAC
CAAGTGTTGAAGCAATGCAACGGGATGTAATTGAATGCGAGAAGGTAATAAAGCGTTACT
CCCGTGACGAATCGCGTACACCGTGCACTGGACTTCTTCCTACTTGGTGCAATGATAGAT
TATGTGAAGACATGGGATGCAACCCGAGAAGGAAGACTGGATTTTTTGCCGAATTATTTG
AGGTCTATGGTCCCGATGATTATAATGATATTCACCCTAAGTAAGAGTAGATCTTTAGCC
ATGATATTTTTCATGAGGCTTAATTACTAGTCTCTGCTTGCTTAACTCCGTGTATAATTT
CTGTCTAAACTATACTTCCAGTTGTCATATATGCACGTTCAATAAAACCACTTGCCATTT
TCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK362375	2398	0.0	1854 - 2396	99	542 / 543	None	ABC07773 ABC22018 ABC23394
MLOC_37067.3	1350	0.0	823 - 1350	99	527 / 528	None	ABC22018
MLOC_37067.1	1350	0.0	852 - 1347	100	496 / 496	None	ABC22018
MLOC_37067.2	1344	0.0	846 - 1341	100	496 / 496	None	ABC22018
MLOC_63757.3	930	1e-70	311 - 725	78	327 / 417	None	ABC16392 ABC22018
MLOC_63757.1	1614	1e-70	995 - 1409	78	327 / 417	CUST_4918_PI390587928	ABC16392 ABC22018
MLOC_63757.2	1884	1e-70	1265 - 1679	78	327 / 417	CUST_4918_PI390587928	ABC16392 ABC22018