barSeed - Barley Seed Development Database

Probe ABC21737

Source Contig ABC21737

barSeed

Links

Affymetrix Source Sequence (466 bp)

>ABC21737 466
TGGGGTTGGGCCTGGAGCGCGAGGCCATGCATTACTATGGAGCGCAGGCCATGAAGGTGA
TGTTGCAACACGTTGAGTACTTCATCGCCGCCGAGGAGAGCACGCTCTACGAGAAGTACG
GCAAGGACCACCCGGCGGTACGTGACCCGGACTCGATACACAAGCAGGGATGGCAGGGTG
CAAAGCAGTACTTCTGGGCGGAGCAGGACATTAGACTCAACGTCACCAGATTTGCTCCCA
CGCTGCATCAGATACTTCAGACGATCCGGGAATAGAAGAAGCAGATGTGGGATATATACC
ACTAGCTAGTACTCCCTTTGTCTTAGTGTTAAAATCGCCTTATGTTATTTATATGGGGGT
TGCTACGCATCCGCCGGTAGATGAATTGAAAACATCATCCACCTCCTTCACCGTTGGATT
GTGACACAAACAGCCGGCAGATCTCTCCTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_75089.1	2165	0.0	142 - 592	100	451 / 451	CUST_41669_PI390587928	ABC11664 ABC14311 ABC21737
MLOC_75089.2	2183	0.0	142 - 592	100	451 / 451	CUST_41669_PI390587928	ABC11664 ABC14311 ABC21737
MLOC_75089.4	1562	0.0	1 - 408	100	408 / 408	None	ABC11664 ABC14311 ABC21737
MLOC_75089.3	1543	0.0	1 - 408	100	408 / 408	None	ABC11664 ABC14311 ABC21737
MLOC_70966.1	2229	2e-53	1820 - 2083	81	217 / 267	CUST_4908_PI390587928	ABC11664 ABC14311 ABC21737
MLOC_70966.2	2205	2e-53	1796 - 2059	81	217 / 267	CUST_4908_PI390587928	ABC11664 ABC14311 ABC21737
MLOC_70966.3	2391	2e-53	1728 - 1991	81	217 / 267	CUST_4908_PI390587928	ABC11664 ABC14311 ABC21737
MLOC_70966.4	2415	2e-53	1752 - 2015	81	217 / 267	CUST_4908_PI390587928	ABC11664 ABC14311 ABC21737