barSeed - Barley Seed Development Database

Probe ABC21200

Source Contig ABC21200

barSeed

Links

Affymetrix Source Sequence (968 bp)

>ABC21200 968
GGCGAGGAATTTGGAGCCAGACGCGAAATGCTACAATGCAAGGCTGCGGGGTTTGGTTGC
GCAAGGCAGGATTGATGATGCAGCTGCTGTGCTTGAGAGGTTGGAGAAGGACGGGCCGAA
ACCCAATATCGTATCCTACAATGAGTTGATTCGAGGATATTGCAAGGCAGGGAGGCTCCA
GGAGGCCAAGAAGATGTATGATAATCTGATGAAGAATGAGTGTGTCCCGGATAAGGGGAC
ATATGAGACTCTCTTGCCACATCTTCTGCAGGCTGGAGAGCTGGATTGTGCACTGAGGTA
CTGTTATCAAATCTTTGGTACTAAAAGGTGTTGTGGAGTCGAGTATGGTGTGCTGCAGGA
TGTTGTGAATGCATTGGTAGATGCATCGAGGCTGAAGGAGGCTACCAAGCTTGATGAGCT
CAAGTGGAAGTACAGCTCGAGGATGCCACCTAGTGCTGAAATGATGAGGAAGAATCAATA
TCAGATGAAAAGGAGTGTGGAAGTGGAAGATGAGACTGAAAAATAAAATTCATAGGTCAG
GCTTTGACTGATGCAAGCCGAATTCCACCAGACCTGTTTTACTCTGTTTCTTCTGTTGGT
ATGATGGAACAAAAAATGCAAGTTTAAGTAGTCGTTAAACTAGTTTAATATGGTATTGGT
TAATCTTGACCTGTGTTGTACTACTTTTAGAAGAGTGCAGCCCCCGGCTGGGCTCTGCCC
GGCCATGGTGCTGCCCCCGCTGACTCCCTACGGACCTCCTCCAGTGAGGCAACGAGAGTG
CAGCAGGTTTGTCAGTTGCAGAACTCATGCGCATTGTGGTTATGAAAAATAGTTGCCAAT
TTCATCACGGTGGTTGGGTCTTTTTGTGTTTGGGGAACTCTTGAATACCACTGCAGGTTC
TATCAAATAAATGCACTTGGAAAATACCTGTGTTTTCCGGTGTCTATTGGTCTAAAAAAA
AAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_78661.1	1693	0.0	70 - 1023	99	950 / 954	CUST_7821_PI390587928 CUST_24729_PI390587928	ABC21200
MLOC_71446.1	1773	2e-70	102 - 327	88	201 / 228	CUST_32931_PI390587928	ABC21200 ABC34548
MLOC_37433.1	1909	1e-128	866 - 1283	87	362 / 418	CUST_32931_PI390587928	ABC21200 ABC34548
MLOC_37433.2	1806	1e-128	865 - 1282	87	362 / 418	CUST_32931_PI390587928 CUST_25064_PI390587928	ABC21200 ABC34548