barSeed - Barley Seed Development Database

Probe ABC21004

Source Contig ABC21004

barSeed

Links

Affymetrix Source Sequence (512 bp)

>ABC21004 512
CCCCGGCTCCTGTTCAGGTTCAGATGCAGCTGGGCATCTACGGGCCCCGGGCTCCGGTGC
GCGGGTACCCCGTCACGATGTCCCCCGTGCGGTCCGTCGTCGCGCCGCACGTCGGCGAGC
AGTGCCATGCGTTCGGCGGAGAACCCGTCGTGGCCCAGCAATACTACGGGTACGGGTACG
GGGAAGGAGCGTACGGCGCTGGTACTAGCAACAACGGAGGAGCCTGTGCCGACGAGGAGA
GCTCGTCCAACGGCGTGCCGGTGCCGGCGGTGGGCACGGAGGAGCCGGAGCCAGCGGAAG
AAGAATCGCAGGACAAGCCCGTCCAATCTGGCTAGCCGCGGGGGCGGCGCGCGTTAGCTT
CCGCGTCCTGCGCGTACTGTAATAATTTGCCGTGTCGATCCGGCGAAAGTTTGTGTGTGC
TACTGGTTACCTAATGTGGGCTTGTTCTTTAGCAATTCATGTACTCTTTGCTGTTGAAGT
TATCGTCGATCGCTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_60891.3	3324	0.0	1295 - 1791	100	497 / 497	CUST_27723_PI390587928 CUST_16135_PI390587928	ABC21004 ABC24430
MLOC_60891.1	3613	0.0	1471 - 1967	100	497 / 497	CUST_27723_PI390587928 CUST_16135_PI390587928	ABC21004 ABC24430
MLOC_60891.4	1876	0.0	1 - 351	100	351 / 351	None	ABC21004 ABC24430
MLOC_60891.2	1905	7e-73	1299 - 1447	100	149 / 149	CUST_27723_PI390587928 CUST_16135_PI390587928	ABC21004