- Probe ABC20479
- Source Contig ABC20479
Affymetrix Source Sequence (601 bp)
>ABC20479 601 CCCAGTCCGTGGAGAGGAGGGGAACAGGTGGACGTCCATGGACGCCACGGCGGATCCCCT GCTGCCCCAACCGGCAGCCGCCGTGGACCACCTCGGCCGCCCAGTCTCCCGCCTCACCTC CGGCAGTTGGCCTGCCGCGTTCTTCATCATCGGCGTGGAGATCTCGGAGCGGTTCGCCTA CACCGGCATCTCAGGGAACCTCATCACCTACCTCACCGGCCCGCTGGGGCAGTCCACGGC GTCCGCCGCCGCGACCATCAACGCGTGGAGCGGCGTCGCGCTCCTGCTGCCGCTGCTCGG CGTGGCCGCCGTCGCCGATTCCTGGCTCGGCCGTTACCGCACCGTAGTCTGCGCCTCTCT GCTCTACATCCTGGGCCTGGGCATGCTCACACTGTCATCAATTCTTGCGACACAACTACC AGCAAAATTTGGAGACCGCATGGATTCCGCTCTATACTCGACTTCGGCTGCTCATTTACC CTTCTTCTACATCTCCCTGTATATGGTGGCCTTTGCTCAAGGTGGGCACAAACCTTGTGT GCAAGCATTTGGGGCAGACCAATTTGATGAGAACGACCTCTAAGAATATGNTCCGAGGGG G
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_1137.2 | 2183 | 0.0 | 1571 - 2160 | 99 | 589 / 591 | CUST_24754_PI390587928 CUST_33382_PI390587928 | ABC20479 ABC21055 ABC38117 |
| AK361798 | 2188 | 0.0 | 2 - 583 | 99 | 579 / 583 | CUST_24754_PI390587928 CUST_33382_PI390587928 | ABC20479 ABC21055 ABC38117 |
| MLOC_1137.4 | 1845 | 0.0 | 1 - 503 | 99 | 501 / 503 | CUST_24754_PI390587928 CUST_33382_PI390587928 | ABC20479 ABC21055 ABC38117 |
| MLOC_1137.3 | 2330 | 6e-64 | 2198 - 2330 | 100 | 133 / 133 | CUST_33382_PI390587928 CUST_24754_PI390587928 | ABC20479 ABC21055 ABC38117 |
| MLOC_1137.1 | 2292 | 5e-75 | 2104 - 2256 | 100 | 153 / 153 | CUST_33382_PI390587928 CUST_24754_PI390587928 | ABC20479 ABC21055 ABC38117 |
| MLOC_1137.6 | 1069 | 5e-75 | 910 - 1062 | 100 | 153 / 153 | CUST_33382_PI390587928 | ABC20479 ABC21055 |
| AK365159 | 2139 | 0.0 | 51 - 622 | 90 | 517 / 577 | CUST_28114_PI390587928 CUST_32752_PI390587928 CUST_31755_PI390587928 | ABC20479 ABC21055 ABC38117 |
| MLOC_44794.2 | 2169 | 0.0 | 1564 - 2135 | 89 | 512 / 577 | CUST_31755_PI390587928 CUST_32752_PI390587928 CUST_28114_PI390587928 | ABC20479 ABC21055 ABC38117 |
| MLOC_44794.3 | 1894 | 0.0 | 1309 - 1880 | 89 | 512 / 577 | CUST_32752_PI390587928 CUST_31755_PI390587928 CUST_28114_PI390587928 | ABC20479 ABC21055 ABC38117 |
| MLOC_44794.6 | 1211 | 2e-154 | 520 - 946 | 90 | 388 / 432 | CUST_32752_PI390587928 | ABC20479 ABC21055 |
| MLOC_44794.7 | 785 | 2e-154 | 98 - 524 | 90 | 388 / 432 | None | ABC20479 |
| MLOC_44794.4 | 2103 | 2e-154 | 1419 - 1845 | 90 | 388 / 432 | CUST_31755_PI390587928 CUST_32752_PI390587928 CUST_28114_PI390587928 | ABC20479 ABC21055 ABC38117 |
| MLOC_44794.5 | 1017 | 9e-152 | 567 - 1003 | 89 | 391 / 440 | CUST_31755_PI390587928 CUST_32752_PI390587928 | ABC20479 ABC21055 |
| MLOC_1137.5 | 549 | 8e-73 | 346 - 494 | 100 | 149 / 149 | CUST_33382_PI390587928 | ABC20479 ABC21055 |