barSeed - Barley Seed Development Database

Probe ABC20237

Source Contig ABC20237

barSeed

Links

Affymetrix Source Sequence (572 bp)

>ABC20237 572
CTGCTATGCAGCCATTGAGGCGTCTCATGTCAGTTCTCGAAGCCAGTGATGAGCTGGTGC
CAGAGGAAGAGTTGCCTGAGGTTGGCCCTCTCAAACCTGACGACGTGGAACTTGCTTTGA
GCAACACAAGGCCGTCAGCACATCTCCAAGCACATCGGTATGAAAAATTTAACCAGGACT
ACGGGAGCCATATTCTTTCTTAATAAGATCAACAAAGCACGGTCAGCTTCTCAGGTTTGC
CAAGCGGATGCGCGTTGGTGGTTCATTTGAACATGTACCGGTACAAAGCTATCTTGCCCT
ACAAGGCCACGCCAATCGAAATGGCCTTGTTGCTCCATTATATTTATCATTGGACTGTCG
CCAAGCAGGATGCAAAAAACTCTTGATGTGTCTCTTCTAGCGGGACTATACTGCTTTGGA
GATCCTGTGAGCCAGAGTGGTCTTAGGAATAGTTTCTTGCCTGATGTAACGTCTTTTTTT
TTGAATTGTCTGGATTGCTTATCACATGTTCTCGCTTGTAGTAACTTTGTTATCAGAAAT
AAAAGTGCATGGAAGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK252202.1	1573	0.0	1019 - 1573	100	555 / 555	CUST_40648_PI390587928	ABC20237
MLOC_55890.1	1799	0.0	626 - 1183	99	557 / 559	CUST_40648_PI390587928 CUST_28204_PI390587928	ABC06802 ABC20237 ABC38595
MLOC_55888.3	2455	6e-84	1617 - 1785	100	169 / 169	CUST_40648_PI390587928 CUST_28204_PI390587928	ABC06802 ABC20237 ABC38595