barSeed - Barley Seed Development Database

Probe ABC20093

Source Contig ABC20093

barSeed

Links

Affymetrix Source Sequence (1052 bp)

>ABC20093 1052
GCAAGTTTGAGAAACCTAAGGGTGACCCTTCTGCCTTCGTGAAACCCGCAACAACGGTCT
TGTCACCTTATCTGAAATTCGGTTGCCTGTCGGTGAGGTACTTTTACCACTGCATTCAAG
ATGTCTACAGGAGTGCCAAAACGCATACAAAACCACCTGTTTCGTTGGCTGGCCAGCTGC
TGTGGAGGGATTTCTTCTACACAGTGTCTCTTGGCACTCCTAATTTCGATCATATGGAAG
GGAACCCAATATGCAAACAGATCCCATGGAGAGAAAGCGAGGAGCTATTTGTTGCATGGA
GAGATGGCCGGACAGGATATCCATGGATAGATGCCATCATGATTCAGTTGAGGAAGTGGG
GTTGGATGCATCATCTTGCACGCCACTCTGTTGCTTGTTTCCTGACGCGGGGTGATCTGT
ATATCCACTGGGAGCAAGGCCGTGACGTCTTCGAAAGGCTACTGATAGATTCTGACTGGG
CGATTAACAATGGCAATTGGCTATGGCTCTCCTGCTCATCATTCTTCTACCAGTATCATA
GAATCTACTCCCCAATATCATTCGGAAAGAAGTACGATCCCAATGGAGATTATATCAGAC
ATTTCATCCCAGTGCTGAAAGACATGCCCAAGGAGTACATCTACGAGCCTTGGACTGCAC
CCCTGAGCGTGCAGGAAAAAGCCAGGTGCATCGTCGGCAAAGACTACCCAAAACCAGTGG
TTGACCATGAGGCTGCAAGTAAAGGATGCAGGAGGAGGATGGGGGAAGCTTATGCGTCTA
ATCGCCTAGGCGGTAGCACTGTCAAAGGAAATTCCTCGAATTCATCGCGAAGGAAGTTGT
GTCATGGGGGCCAAGATGTCCCCGATTCATCCAAGTCCAAGCAACCGAGGAAGAGGAGCT
GAACCCAGAGTAGAAAAGTCTTAACAAGAAGTATCTGACCCTTTTTAGGGAACTGTAGTA
TCCGACTCTCTTAACTTAATGGTTCTTATCAACTCTTCAATCGTGAGTCTAGCGCTTGAT
GACTTATTAATGATCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK360897	1765	0.0	769 - 1765	99	995 / 997	None	ABC20093 ABC28529
MLOC_38893.1	900	0.0	114 - 730	99	616 / 617	CUST_6840_PI390587928	ABC20093 ABC28529
MLOC_74683.1	1859	0.0	389 - 810	99	421 / 422	None	ABC20093
MLOC_74683.2	1391	0.0	145 - 566	99	421 / 422	None	ABC20093
MLOC_74683.4	1320	0.0	1 - 360	100	360 / 360	None	ABC20093
MLOC_74683.3	1289	2e-75	1 - 154	100	154 / 154	None	ABC20093