barSeed - Barley Seed Development Database

Probe ABC20005

Source Contig ABC20005

barSeed

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Affymetrix Source Sequence (349 bp)

>ABC20005 349
GTTCCTCATATTCCATCCCGATTTTTGATGGTGAACGGGATGGTTTGCGAGTCGTGTATA
GTGTAACACAGAAGCAGTAATGGGCTGACAAAGTGGCAATCTCTGTACAGGAAATTAATT
TTATTCATTTAGGTGCTTGCTTTTATTGGTGTTGTGAAGAGGCTAATATCTTCCTGGAGA
TGAAGGAAGATTAAAGATTGTATATTGTATTACAGAGGGGTGTCTGGAAATATTATGGGG
ATGTACCTATAGAGTTGTTGGGCTGTCATACTTCCATGTACCATATGTCCAGTCTTGTTG
TATAGATGAGGGTGCTTCTCTTTCCAGTTATGTTCACGAAAATGAAAAG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK252389.1	1146	2e-180	746 - 1093	99	347 / 349	CUST_21033_PI390587928	ABC20005
MLOC_6311.1	1359	1e-163	51 - 391	97	338 / 349	CUST_21033_PI390587928	ABC20005
MLOC_6311.2	1303	1e-163	51 - 391	97	338 / 349	CUST_21033_PI390587928	ABC20005
MLOC_6311.4	2016	1e-163	28 - 368	97	338 / 349	CUST_21033_PI390587928	ABC20005
MLOC_6311.3	1690	1e-163	51 - 391	97	338 / 349	CUST_21033_PI390587928	ABC20005