barSeed - Barley Seed Development Database

Probe ABC19972

Source Contig ABC19972

barSeed

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Affymetrix Source Sequence (466 bp)

>ABC19972 466
AGCGGCGCCCATCGCCCCGCCAGCGACAGCCCCCGCACCGGCGCCCATGTCACCGGCACC
GGCACCGGCTCCGATCTTCGCCCCGACTCCGTCGCCCACGATGGCACCGGAGCCGGCGCC
GACCATGGCGCCCGAGCTGTCGCCCATCATGGCCCCTTCGCTGTCCCCGCTCGGCTCGGC
AGGCCCCGCGCTGGCGCCCGTGGCAGAGGAGGACTCGGCGGCCGGGAGCGCGCGCGCCGG
CGTCGCCGCGCTCGCGGCGTTGGTTGCTGCCGGGCTCGTCGTCTTGTTTTAATTGATGGT
TACTTTACTTTTGGTCATCTTGTTTACACGAGCGTGTTGTCCCCGCCGACGTTCCTCTGG
GCGTCGCATGTACTGCGAAGGATTCTTGGTGTACTGCATGCACATTGGTCATTTATTAAT
TTCTTCTTATAAATATATGGATGGGTGGGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK375966	1391	0.0	964 - 1377	99	412 / 414	CUST_35264_PI390587928	ABC19972
MLOC_11681.1	338	2e-122	98 - 338	99	240 / 241	CUST_35264_PI390587928	ABC19972
MLOC_17418.1	657	2e-73	10 - 162	99	152 / 153	None	ABC19972
MLOC_17418.2	567	2e-73	4 - 156	99	152 / 153	None	ABC19972