barSeed - Barley Seed Development Database

Probe ABC19722

Source Contig ABC19722

barSeed

Links

Affymetrix Source Sequence (1047 bp)

>ABC19722 1047
GCAGCAGCAGTACCTACCCGGAGCGAAGAACCACCAGCCTTCCCTAGCACCAACACCCAC
GGAGGCGATGGCAGTCGAGGCCACGACAGAGAAGAACACCGGCACCGGCGCGGCTGGCGG
AGTAGCCCCGGAGAGCGGGGACAGGCGCTCCCGGTTCAGGCGGATCTGCGTCTACTGCGG
CAGCGCCAAGGGCCGAAAGGCCAGCTACCAGGACGCCGCCGTCGAGCTCGGCAAGGAGCT
GGTGGAGAGGGGCATCGACCTGGTCTACGGAGGAGGCTCCATTGGGCTCATGGGCCTGGT
CTCCCACGCAGTTCATGATGGAGGACGACATGTGATTGGGGTCATCCCCAAGTCCTTGAT
GCCCAGAGAGGTCACTGGAGAGCCTGTGGGGGAAGTAAGAGCTGTCTCCGGCATGCATGA
GAGGAAGGCCGAGATGGTTCGCTCTGCTGATGCTTTCATTGCCTTACCCGGTGGCTACGG
GACTTTGGATGAGCTGCTCGAGGTCCTCACCTGGGCCCAACTTGGGATCCACAAGAAGCC
GATTGGGCTTCTGAACGTGGATGGGTTCTACAACTTCTTCCTGTCCTTCATCGACATGGC
TGTGAGTGAAGGATTCATAAAGGAGGACGCGAGGCACCTCGTCATCTCAGCTCCTACCGC
CAAGGAGCTAGTTCTCAAGCTTGAGGAATATGTTCCAGACTACGAGATCGGGTTGGTTTG
GGAGGATCAGGGCCAGATCGGCCACGGCTTCGTGCCAGAGCTGGAGCCTGGCATTGCGTC
GTCATGATATGATTCATCCTGGAAGCGTTTCTGAACTAAGTAACATCTGACCGTGCAAAA
AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGAATGTGCTAGTCCTTGTCGGT
CGTAGCTTTTGTCGCTGCCGGTGGCATGACAGTGTTAGCATTGAGTTGCAGTAGCAGTGT
TAGCATTGGGTTGATGATGGCGTTCTTTTGGTCATAGCTTAGGTAGAAGTAAGTGATTGC
ATGTNCAAATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_180.2	814	0.0	329 - 814	99	485 / 486	None	ABC19722
MLOC_73235.1	736	0.0	255 - 625	100	371 / 371	None	ABC19722
MLOC_73235.3	839	3e-178	471 - 809	100	339 / 339	None	ABC19722
MLOC_180.3	517	1e-162	204 - 517	99	313 / 314	None	ABC19722
MLOC_63748.2	866	2e-110	27 - 423	85	339 / 399	None	ABC19722
MLOC_180.1	928	7e-86	329 - 501	100	173 / 173	None	ABC19722
MLOC_10181.1	300	2e-76	1 - 158	99	157 / 158	CUST_16558_PI390587928	ABC19722
MLOC_63748.1	271	9e-70	44 - 271	88	202 / 230	None	ABC19722
MLOC_73235.2	546	4e-63	248 - 379	100	132 / 132	None	ABC19722