barSeed - Barley Seed Development Database

Probe ABC19418

Source Contig ABC19418

barSeed

Links

Affymetrix Source Sequence (949 bp)

>ABC19418 949
ACCTCTCATAACTTTCTCCTTGTTTTTCTCTCCGCTCTATGATGTTGACTCCATCCTTCC
CGAAAGCAAATCCCCCTAGGATTCCCCAAGGTCATATCCCGCATGGATACCCCAAGTTCA
TACACGCGCCGACTAGATGCCTCGTCTCTCTTTTGCCGCAAATTGGCCGCCGCCGCTGCA
GGTAGCCATGGCACAAGACAAGTCATGGAGCACCCATTACCGCTGCAAAGGAATTGCAGC
CTAAGGATGTTTCTCCGTGGGTTGCGTGTCTACGGCCGTGGCGACTGGAAAAACATATCC
AAGCATTTTGTCACTACTAAAACTCATATCCAAGTCTCAAGCCATGCACAAAAGTACTTC
AAGAGGATAAATAAAAGGGCATCGTTCGGGACACAACGTTATAGCATTAATGATGTTGGA
CTAGATGATGATGACCTATGGGCGGTGAATAATAGTTCTAGTCCCTCGCAAATGATGGGT
TTCAATGGGCTCAACAATGAAACAAGCTTCGGCATGCACGATCCGACAAGCTCTTCCATA
GTCATGAACAACCAACCTCACTTGTGGCCACCTGTCACATATAGTCAACAAGAAAATCAA
CAACCAATGTGGAGTGAGCATCAGATGTTGGGGTCTACTACAGTTGTAATGGGCGACATG
AGAAATTCCGCTCCACCAAGTCAATAAGCATTGACTTGTTTTCTTCTTGTCAATATATGA
ATAAGATGTAGTCGATCATAGGTTTGGGAGATGTTTTGTAAGCTATAAATTAAGGTAAGT
GTATAAACAAATTTCCCTCCAAAAGATGGCAACGCAATAAGTTGAAGGCAGTATCGCTAA
AGTTCTTGTTTGGGAAGCCAATAACTATGTTTGTAAAAAACAATGTATTCCGCCCTATAT
ATGTACCATTATATTAACATGCTGTTTTTTTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_10538.1	960	0.0	1 - 919	100	919 / 919	CUST_12670_PI390587928	ABC19418
MLOC_10538.2	3061	2e-126	2775 - 3020	100	246 / 246	CUST_12670_PI390587928	ABC19418
MLOC_10537.1	864	3e-124	623 - 864	100	242 / 242	None	ABC19418