barSeed - Barley Seed Development Database

Probe ABC19364

Source Contig ABC19364

barSeed

Links

Affymetrix Source Sequence (1124 bp)

>ABC19364 1124
CTTTTTCTCCAGTTCAACTCCGCCGCCCGCCCGCCCGCCCGCCCGTCCCCTCCCCGATCT
CGGGAGAGACATGTCCTGGCGGTGGGCTCTGGCGCGGCGCGTCGCCACGCTCGTCGGCGG
CGGAGGCCCACCCGCTGCCCAGGCGCACAGGCTCTTCTCCTCGTCGGGCGCCCTCCTGGG
GAGGCTCCCTCCCGCGCCGCCCCAGATTCGGAACAAGGTGGTGGGTTGCAGAGGAGCTGC
TTTCGTCAACTCGCGATGGCTGCATGATGCCACCCAGTATCAGACTCGCCAGGATGGGTC
ATCGAGGGCCGAAGAACAACAGGATCCATTTGAATTGGTTGCTGATGAACTATCGATTCT
TGGAAATAGACTACGGTCCATGGTGGCTGCTGAGGTCCCTAAACTAGAATCAGCTGCTGA
ATATTTTTTTAAAGTGGGAGCTGAGGGAAAAAGATTCCGACCTACGGTTTTGTTGCTGAT
GGCATCAGCTCTGAAATTCCCAATACCAGAATCGACAGATATTGGAGTTTTCAGTATATT
GGCAAGTAAGCTGCGCACACGGCAGCAAAACATTGCCGAGATAACTGAAATGATCCATGT
CGCAAGTCTTCTGCATGATGATGTTCTGGATGATGCTGACACTAGGCGAGGTGTTACTTC
ATTGAATTGCATTATGGGCAACAAGCTTTCTGTTTTGGCTGGTGACTTTCTCCTGTCCAG
AGCATGTGTGGCACTTGCAGCACTTGGGAATACCGAGGTGGTATCTCTAATGGCAACTGC
AGTTGGACATCTAGTTACTGGTGAAACTATGCAAATGTCAACAAGCAGAGAGCAACGGCG
AAGTATGGAGTACTACTTGCAGAAGACGTACTACAAAACAGCATCATTGATATCAAACAG
TTGCAAGGCTGTTGCTATTCTTGCAGGACACACTGCTGAGGTTTCAGTGCTTGCATACGA
ATATGGTCGAAACCTGGGTCTAGCCTTCCAGTTGATCGACGATGTTCTTGATTTCACAGG
AACCTCTGCATCACTTGGGAAGGGTTCATTATCTGATATTCGTCATGGAATCATTACTGC
CCCAATGCTATATGCGATGGAAGAATTCCCACAACTACATGATG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_70534.1	1414	0.0	1 - 1023	99	1020 / 1023	None	ABC19364 ABC24329
MLOC_70534.4	2585	0.0	1 - 1012	100	1012 / 1012	CUST_4946_PI390587928	ABC19364 ABC24329
MLOC_70534.3	1181	0.0	1 - 959	99	958 / 959	None	ABC19364
MLOC_70534.2	1555	0.0	1 - 866	100	866 / 866	None	ABC19364 ABC24329
MLOC_70535.1	3194	3e-65	168 - 303	100	136 / 136	CUST_4946_PI390587928	ABC19364 ABC24329