barSeed - Barley Seed Development Database

Probe ABC19146

Source Contig ABC19146

barSeed

Links

Affymetrix Source Sequence (757 bp)

>ABC19146 757
AATCTGAAGCCGGGAGCTGGCACGTGCCGACGACGACCGGCGACGACATCCAGAGCCCGC
GGCAGTGGGTCTGCGCCACCAGGAAAACTTCGGAGAGACCGCCTTCTCCGCCTCCCCAGG
CTCGCGCGACCAGCAAAACTTTGGAGGGACCGCCTTCTCCTCCGCCCCAAGCTCGCGCCA
CCGGCAAAACTTTGGAGGGACCGCCTTCTCCGCTGCCTCAAGCTCGTGCCACTAGGAAAA
CTTCGGAGGGACCGCCTTCTCTGCCTCCCCAGGCTCGCACCACCAGCAAAACTTTGGAGA
GACCGGCTTCTTCGCCGCCTCAAGCTCATGCCGGTAGCAAAACTCTGGATAGACCGCCAT
CTCCGCCGCCCCAAGCTCGCGCCGCCAGGAAAACTTCAGGGAGACTGCCTTCACCGCCAC
CCCAAGCTTCTGCCACTAACAAAAATGCGGAGAGACCGTCTCCTTCACCAAAAGCAAGGT
TAAGTGATCTTGGTTGGTAGCCATTGCTAGACCCCTGGGAAGTAGAAAAATAGCACCCAG
ATTTGGGCCTATTTATTTTAGATTTAAAGAGAAACAGGGCAATTAGGTGCACCCTATAGC
TTAGCAGCTCTTGATTGAGGCTGAGATGATTATGTAGCAAGTAAGTTGAGCTGCCCACCA
ACATACATCTATGAAGTTACTCCATATTGTTTGGTTGACATGGTCATTAGTTGCCCATGA
AAAATATAAATTTTTGCTGTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_60701.1	3256	2e-64	1835 - 2139	81	249 / 306	CUST_13123_PI390587928 CUST_313_PI390587928 CUST_28521_PI390587928	ABC19146
MLOC_60701.3	962	2e-64	277 - 581	81	249 / 306	CUST_28521_PI390587928	ABC19146
MLOC_60701.2	3005	2e-64	1584 - 1888	81	249 / 306	CUST_28521_PI390587928 CUST_13123_PI390587928 CUST_313_PI390587928	ABC19146
AK376123	2377	1e-52	1865 - 2103	83	199 / 241	CUST_13123_PI390587928 CUST_28521_PI390587928	ABC19146