barSeed - Barley Seed Development Database

Probe ABC19031

Source Contig ABC19031

barSeed

Links

Affymetrix Source Sequence (462 bp)

>ABC19031 462
GCACGAGGAGAGGCAACACACCGGGCACGCTATCTTGTGCATGATGGGAAATATGAAGAT
GTCTTTTGATGATGCTTTGAACCGAGCCACTTCCTATGCCAAAGTTGACTCCTCCATCTG
AAATCTGGGATGCACTAAAGAAGGTACCAGACTTGCATGATAGTGATATGTTCAGAGCTT
AGGGAAAATTGATCGTCAATGAGCATTTATTTAAAGCACTCATGGCGCTATCTGAGGAGT
TAAGGAAGCCATGGCTCTTGACCTTGGATTGATTGTTGCTATCATGTTTGGTTGATGTAT
GGATTACTATGTATTTTGTTGTTTGCGAACTGTCTATTTGTGCTATGTGTAAGAGACATA
AACTATCCATTTGTGCTATGTGTAATAGACAGAAACTACCAAAATTATTATCCATGATGT
GTTCGGGACACTTCAAATCTATTTTGTTTCATGTTTTTACTC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK366711	2015	0.0	1590 - 2015	100	426 / 426	None	ABC19031 ABC48864
MLOC_79100.1	394	4e-179	1 - 394	95	376 / 394	None	ABC19031
MLOC_79101.1	408	9e-146	1 - 325	95	310 / 325	None	ABC19031
MLOC_49973.1	863	7e-127	305 - 766	85	394 / 464	None	ABC19031
MLOC_29913.2	576	8e-117	47 - 359	92	287 / 313	None	ABC19031
MLOC_29913.1	555	8e-117	190 - 502	92	287 / 313	None	ABC19031
AK250505.1	1727	8e-107	1445 - 1681	96	228 / 237	CUST_23121_PI390587928	ABC19031 ABC48864
MLOC_63612.4	3472	2e-67	3074 - 3437	80	291 / 365	CUST_1267_PI390587928	ABC19031
MLOC_63612.9	1354	2e-67	1 - 364	80	291 / 365	CUST_1267_PI390587928	ABC19031
MLOC_63612.7	1564	2e-67	1 - 364	80	291 / 365	CUST_1267_PI390587928	ABC19031
MLOC_63612.8	1745	2e-67	1 - 364	80	291 / 365	None	ABC19031
MLOC_63612.6	1681	2e-67	24 - 387	80	291 / 365	None	ABC19031
MLOC_63612.5	1208	2e-67	24 - 387	80	291 / 365	None	ABC19031
MLOC_63612.1	2071	2e-67	62 - 425	80	291 / 365	CUST_1267_PI390587928	ABC19031
MLOC_63612.2	1164	2e-67	62 - 425	80	291 / 365	None	ABC19031
MLOC_63612.3	1963	2e-67	49 - 412	80	291 / 365	CUST_1267_PI390587928	ABC19031
MLOC_18692.1	151	2e-57	1 - 151	93	141 / 151	None	ABC19031