barSeed - Barley Seed Development Database

Probe ABC18746

Source Contig ABC18746

barSeed

Links

Affymetrix Source Sequence (1011 bp)

>ABC18746 1011
CCCGACGCCGCCGAGCTCCACCCACAACCTCCCCCTGCCGGCTCTGCCGCGGTACAACGA
CACCAGCGCCGTGGCCAGCTTCACGAGCAACTTCCGGAGCCTCGCCAGCGCGCAGTACCC
GGCGCGCGTGCCGCAGGCGGTGGACCGGCGCGTCCTGTTCACCGTCGGCCTCGGCACCGA
CCCCTGCCCGTCCAACCAGACCTGCCAGGGCCCCAACGGCACCAAGTTCGCCGCGTCCAT
CAACAACAACTCCTTCGTCCGGCCCAGGAGCGCCCTCCTCGAGGCGCACTACCAGCGCCG
CTACGCCGGCGTGCTCATGGCCAACTTCCCGACCACGCCGCCGCACCCGTTCAACTACAC
CGGCGCCCCGCCCAACAACACGTTCGTCGCGCACGGCACGAGGGTGGTGCCGGTCAAGTT
CAACACCTCGGTGGAACTGGTGATGCAGGGCACCGCCATCCAGGGCGCCGAGAGCCACCC
CCTGCACATGCACGGCTTCAACTTCTTCGTGGTAGGCCAAGGGTTCGGCAACTACGACCC
CATCAACGATCCGGCCAAGTACAACCTCGTCGACCCCGTCGAACGGAACACCGTCAGCGT
GCCCACCGCCGGCTGGGTCGCCGTGCGGTTCCTCGCCGACAACCCAGGTGTGTGGCTTAT
GCACTGCCACTTCGACGTCCACTTGAGCTGGGGCCTGTCCATGGCATGGATGGTCGACGA
CGGGCCGCTGCCCAATCAAAAGATGTTGCCTCCGCCGTCCGATCTTCCGAAATGCTGATG
GCTCGTACAAGCGGCGGAGATCTGCGAATGATTTCTTGCCTGCCCACCGCATTTCTCTCT
TCATGTTCGACGTACCAACTACCAACTCCTTGATCAGGACTGTTTTATTTGTACTGATGT
GCTGATCTTCTGGGAAGTCATCGGACTTTGTTTCCACGCACTTGAATTCCCATTTTGAAT
CTGAATAAAATGTCACAAACTGTGTTTCTTCTTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_75304.1	2008	0.0	1038 - 2008	99	970 / 971	CUST_278_PI415269222	ABC18136 ABC18746
MLOC_22174.1	2702	1e-163	225 - 969	81	604 / 747	CUST_37824_PI390587928 CUST_34152_PI390587928	ABC18136 ABC18746
MLOC_22174.2	2130	1e-128	298 - 928	80	507 / 633	CUST_37824_PI390587928 CUST_34152_PI390587928	ABC18136 ABC18746
MLOC_69899.4	1985	1e-122	891 - 1648	78	598 / 768	CUST_17238_PI390587928 CUST_18700_PI390587928 CUST_19430_PI390587928	ABC18746 ABC18837 ABC47164
MLOC_69899.2	2132	1e-122	1038 - 1795	78	598 / 768	CUST_17238_PI390587928 CUST_19430_PI390587928 CUST_18700_PI390587928	ABC18746 ABC18837 ABC47164
MLOC_69899.1	2211	1e-122	1192 - 1949	78	598 / 768	CUST_17238_PI390587928 CUST_32937_PI390587928 CUST_18700_PI390587928	ABC18746 ABC18837 ABC47164
MLOC_61206.1	2443	5e-102	424 - 1146	76	557 / 730	CUST_17502_PI390587928 CUST_27786_PI390587928 CUST_2512_PI390587928	ABC18447 ABC18746 ABC46355
MLOC_69899.3	1749	6e-101	1133 - 1746	78	488 / 623	CUST_18700_PI390587928 CUST_17238_PI390587928	ABC18746 ABC47164