barSeed - Barley Seed Development Database

Probe ABC18687

Source Contig ABC18687

barSeed

Links

Affymetrix Source Sequence (670 bp)

>ABC18687 670
GGCTGAGGAATTCGGACGAGGACACGCCCAGCTGCTCCGGCTTCTCCTCCACCTCCTCCG
GCTGCCCCTGCTGCTGCCGCTGCTGCAAAGCAACGGCCGCTCTCACCCTATGCAGCGTAC
GAGGGGTTGAAGCCACCGTCTTCCCCAACCCCCAGCAGGAGCAGCAGCAAGAAAAAGGAC
GACGGCGATTCTCCTTCGCCACCGCCCTCCGCCGCCTCTCCGGATGCGGCGACTACCACC
ACCACCGCCGAGGCTGCAGCCGAGTCGTCGTCGCCGCTGTTGGATTCCAACGCCAATGGC
GTTCCTCCCACCGCCGCCCCTGCCACTGCTGATCCAGGGCGCCCGCTTTCACCATACGCC
AGGTACGAAGACCTGAAGCCTCCAACCACGCCAACTCCATCCGCGCCAAAAGTATAGAGC
GGCCGGCCCGGCGGTTACTTTCATTTACCTTTTCTTTTCCTGCTCGATCGGCGGCCTCTG
CCCGAGCGCGAGCTCAAGGCACGTGTATATGCCAATTTTCCTTCTTCGAGAAAATACCAA
TGTACACGAGGATGGCAAGATGCATATTTTTTTTCCCGAAAAGGAGTCCCGGGCCTCTCA
TCGACCGATGAACACATCCATTTTTATTATATTATTTAAGAATCTGACAAAATCAAAAAA
AAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_72047.2	2205	0.0	8 - 628	98	619 / 630	CUST_35541_PI390587928 CUST_20014_PI390587928	ABC18687
AK355953	1884	0.0	1333 - 1884	99	550 / 552	None	ABC18687
MLOC_72047.3	2374	0.0	1 - 482	99	481 / 483	CUST_35541_PI390587928	ABC18687
AK354780	1737	0.0	1343 - 1737	99	394 / 395	None	ABC18687
MLOC_72047.1	2671	8e-128	412 - 665	99	253 / 255	CUST_35541_PI390587928 CUST_20014_PI390587928	ABC18687