barSeed - Barley Seed Development Database

Probe ABC18593

Source Contig ABC18593

barSeed

Links

Affymetrix Source Sequence (1097 bp)

>ABC18593 1097
GGATGAGCTGGTTTCAAGTCCAAAAGAAGCTTTTTCCCGGGCCTCTGCTGATAGGAGAAA
CGAACTTATGAAAAGTGGGCTATCTCATTCGTATTCAACACACGGAGATAAAAGTATGGT
GAAATTGAATAAACTGACAGAAAGCAACAGAAGGTTTGGCAGTCGGCGAACCCCTGAACC
TCCTGCGATCAACCAGGGTGCAATCAACCAGCTGTCAGAACAGATATCGACATTGAATGA
GAGGATGGATGAGTTTACCTGTCGGGTTGAAGATCTTAACTCAAAATTTACACTGATAAA
ATCTTCACCAAGTCAGCAAAATTTAGCTCCTCCAAGTGATACTCGTAATGGTTCCGCACC
TACCAATCTCTTTGTTTCTCAGTTGGGTAATGGCACCCTTATACCTCACTCATCATCATC
AAACCAACTTTCAAAAGAGTCTCCATTGACGGAAGAGATCATGGTCTTATCAAGAGGTCA
GCGCCAAGTAATACATCAGCTCGACAACCTCACTAACCTGCTTCATGAGCATTTGGTCTT
GACCCGCCAAGGAAACACCACGAGCAGGAACCGTATCCAGGAAGGAATCGACATGGCAAT
CTGCCCGTTGATAATCCTGACAATTGGCAGTGTCGGTTACTTTGTGTTCAGGAATCTCAA
CCGGACATGACCAGAGTGAACCCGATGAAGTGCGCAGTTCTGATATCTGAAGTTCGCCAC
CAAGTTGAGTCAAGAACCAGAGCAGTCCAGACAGTCTTGATTGATCTTCAGTACCCAGAG
CCCAGACTCCAAAACTGTTACTTTCTCTTGAAGTTATAGTCGGTCCTTGAGTCAGACACC
ATGACGGGGATCATATCTACGTAGTAGGTGTAGATTACAGTTTTTGAGATAGGCGAAAAC
TCATATATACCAGCGCAAGCAACAGAGTTTAGTCTTGATATTGAGCGGAGATACTTCGTA
AGCTTGGAGAAAAAACAATGTACTGGAGGCATACAATGCCTGTAGTCGATACTGGAAGTC
CCAGTATCAATAAATTTTGGGGGTACCGATCACAATCCTGAATTCCTGATAATTTATCAC
AAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_55892.2	2715	0.0	40 - 1119	99	1079 / 1080	CUST_12984_PI390587928 CUST_28193_PI390587928	ABC18593
MLOC_55892.3	2782	0.0	40 - 1119	99	1079 / 1080	CUST_28193_PI390587928 CUST_12984_PI390587928	ABC18593
MLOC_55892.4	2752	0.0	28 - 1107	99	1079 / 1080	CUST_12984_PI390587928 CUST_28193_PI390587928	ABC18593
MLOC_55892.1	2677	0.0	57 - 1136	99	1079 / 1080	CUST_28193_PI390587928 CUST_12984_PI390587928	ABC18593
MLOC_55892.5	2641	0.0	20 - 1099	99	1079 / 1080	CUST_12984_PI390587928 CUST_28193_PI390587928	ABC18593
MLOC_55892.6	1710	0.0	1 - 1054	99	1053 / 1054	None	ABC18593
MLOC_55892.7	2384	0.0	1 - 990	99	989 / 990	CUST_28193_PI390587928	ABC18593
MLOC_55892.8	1972	0.0	1377 - 1832	100	456 / 456	CUST_28193_PI390587928	ABC18593
MLOC_55892.9	1459	2e-91	1 - 183	100	183 / 183	None	ABC18593