barSeed - Barley Seed Development Database

Probe ABC17982

Source Contig ABC17982

barSeed

Links

Affymetrix Source Sequence (584 bp)

>ABC17982 584
GCGCGCACACCATCGGGCGGTCGCAGTGCCAGTTCTTCCGCAGCCGCATCTACAACGAGC
GCAACATCAACGCCACCTTCGCGGCGCTGCGGCAGCGGACGTGCCCGCGGTCCGGAGGCG
GCAGCAGCCTCGCGCCCTTGGACGCGCAGACCGCCGACGGGTTCGACAACGCCTACTACC
GGAACCTGGTGGGGCAGCGCGGCCTCCTGCACTCGGACCAGGAGCTCTTCAACGGCGGGT
CGCAGGACTCGCTGGTCAGGCAGTACAGCAGCAGCCCCGGGCAGTTCTCCGCCGACTTCG
TCACGGCCATGCTCAAGATGGGCGGCCTGCTGCCGTCGCCCGGGACGCGGACGGAGGTCA
GGCTCAATTGCAGGAGGCCCAACTAAATTAAGGGCAAGTAGACGTAACAAGTGTGCTGAA
TAATGGTTGATGCCTTGGAAAGACCAGGCATTGGTCAGGTTCACGTATACTGTATGTATG
TATGTATGTATGTATAAACAACACGAAATGTACAAACGCTCGTTTGCTCATTCCGGGGTG
AACCTGCAAGCTACAATGTATCAAAATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_1826.1	1023	0.0	23 - 590	99	567 / 568	CUST_6405_PI390587928	ABC17982 ABC42758
MLOC_1826.2	1370	0.0	1 - 559	99	558 / 559	CUST_21745_PI390587928	ABC17982 ABC42758
MLOC_74420.1	1450	2e-78	295 - 669	81	307 / 379	None	ABC17982
AK359731	1263	1e-55	647 - 974	79	264 / 333	CUST_13901_PI390587928	ABC03239 ABC03241 ABC03243 ABC17982 ABC18975