barSeed - Barley Seed Development Database

Probe ABC17600

Source Contig ABC17600

barSeed

Links

Affymetrix Source Sequence (652 bp)

>ABC17600 652
GCACGAGGACTGACCGGACGGGTTCTGGCGATGCTATTGTTGCTGCTGCTATTAGGAAGT
TGACAACTTGTCCTGAGATGTATGAGGACCAGGATACATTGGAGAGGGAGCTAAGATTTG
CTGTTGCTGCTGGCATCATTTCACAGTGGACTATTGGTGCCGTGCGAGGGTTTCCCACTG
AAAGTGCTACCCAGAACTTGAAGGAGCAAGTATATGTGCCTTCTATGTGGTGAACTGGTG
ATTGGTTAACTAGTAAATCATTTCTGATGAAGGAGGCAGAAATTTATGTTATGAGCATGA
TTCATAGGTGGTGCAGAAGAAGTGAACAAGGATAATATTTTACCACAAGAGTTGACAGGT
ATAAGGACACTTTAATCTGCGTGTTACGCAGGCAGTGAGCCACGCTTCATGCTGTCCAAT
CAGCGGGGAACTCTTTTGTGCGAGTGTTTCCAGTCACAGAAGCACTATTGTAGCACTTGG
TGGGGATAGGATTGATTGATGTGAAACCCCCACTTCTTTTTCTCCTTTTTCTTTTTGTAT
TTTCTCTTTGCAGACCGGAGAATGCAGCACCCCGGTTCTGCTTCCTAGAAGCATATGTAG
AAATTTTGTAGAGTAAGCAACGCTAGGAACCTCCAGTAATTTGTTCATTCGC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_15972.1	1448	0.0	757 - 1400	100	644 / 644	CUST_18604_PI390587928	ABC17600
MLOC_15973.1	3454	0.0	822 - 1174	100	353 / 353	CUST_18604_PI390587928 CUST_27378_PI390587928	ABC17600
MLOC_15972.2	914	0.0	564 - 914	100	351 / 351	CUST_18604_PI390587928	ABC17600
AK356512	2123	0.0	1418 - 1767	100	350 / 350	CUST_18604_PI390587928 CUST_16172_PI390587928	ABC17600
MLOC_15973.6	2209	5e-155	1868 - 2164	100	297 / 297	CUST_27378_PI390587928	ABC17600