barSeed - Barley Seed Development Database

Probe ABC17359

Source Contig ABC17359

barSeed

Links

Affymetrix Source Sequence (964 bp)

>ABC17359 964
TGTCCATCTCAGAACTACTACCTCAGAGCAAACCATGTAATTTGAATATTCATGCATCTA
TTGGCAAAATTGTCTTAATGGGTTCTCTTAGACCTGAATTGAAGGGGCAATTGCCAGTCA
TTGAGAAACATTCCTTGAATGGACATAATGATATCGTCAGAGATTTTATTACTACTGGAT
GCAAGTTATGTGGTTTACCTCTATACCAAAAGAATCTTCATGGAGACAGTACTTATCCAA
TCGATTGCCCTGATAATCCAAAGTACCTCCATGTTGTTGGCCAGATATATAAACCATTCA
TGATCTATGTGCAAGACCAAACTGGACAAGTTCCTGTGCTTGTGAAGAATAAAGTTGCCG
AGATTCTATTTTCAAATATCAATGCAGATGATGTGTCTGAATGCTACAAGAGCCGCCACT
GCATGCTGGTAGATACTTGTGACTCTGGCCAGTCAAGCACTTGTGGGATGCTAGATGGCA
GTGGCAAGACAGGCATTGCTAAAAGGAAAAGAACCAAACATAAGCTTGATTTTCATCTTA
TCTGGCTCATTGTTATGAAATGCCTGCTGAACCAAGGCAAGAACAGTCCATTCTGCTTCC
AGATTTCAGTCAACCCCGGGAGAAATGTTGAGGATGGACGATTTGAACTGATTTCGTTGA
TAATGCCAATACCATGAGATGGGAATTCTTCTTTTACCACCTATCTCAAACCAAACTAAT
GGTTATTATGTGCCTCTGCAAAAGGAATTGAAGGTCTGTTTTTCACAGGTGATTGCTGAG
TACACTAGAGGTGCTTTGGTGTTCCCATGGTTTGTACAGCGACATGGTTAGGACGACAGA
AATATTAGACCACTAATCTTCAGTTTTAGCAGGATCAACTTAGCAGAAGCAAAGACCTAG
CACATTTATGACAAATCCTCTGTAACACTCTGCTCCTTACTTTTAAAGAGCCCCATATTC
AACT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK367675	1330	0.0	567 - 1330	99	755 / 764	CUST_14133_PI390587928	ABC17359
MLOC_9248.1	681	0.0	1 - 681	98	664 / 681	None	ABC17359
MLOC_9248.2	797	0.0	93 - 754	98	647 / 663	None	ABC17359
MLOC_46252.1	439	0.0	1 - 397	98	390 / 399	None	ABC17359
MLOC_35311.1	375	0.0	1 - 375	99	373 / 375	None	ABC17359
MLOC_47576.1	379	2e-146	71 - 379	97	301 / 310	None	ABC17359
MLOC_32888.1	277	9e-139	1 - 277	99	274 / 277	None	ABC17359
MLOC_46821.1	219	2e-110	1 - 217	100	217 / 217	None	ABC17359
MLOC_76373.1	379	8e-110	1 - 282	92	261 / 283	None	ABC17359
MLOC_31030.1	231	1e-83	60 - 231	99	172 / 173	CUST_14583_PI390587928	ABC17359
MLOC_69965.1	201	5e-72	1 - 157	98	154 / 157	None	ABC17359
MLOC_78481.1	180	2e-65	30 - 180	97	146 / 151	None	ABC17359