barSeed - Barley Seed Development Database

Probe ABC17141

Source Contig ABC17141

barSeed

Links

Affymetrix Source Sequence (1271 bp)

>ABC17141 1271
GCCATAACCAGGTCCAAGCAGGAGCCGGTGGCGTTGAGAGCATGGATTGGGCTGCCATGG
TTATGAACATGTACAAATCATGGGCTCAGCGACGGGGATACAGAGTCACTGTAATAGAAG
AAATGCCTGGTGAACTAGCAGGAATCAAGGTTTGCCCGTTTATTTTTTCATCGCTTCCCA
GCACTGAATCCAGTCAGTTCACCACTTTATTCATAATTACTACCAGTTTTATCCATTTAT
AGAGATGACAACGAATGTGAAATCAAGCCATGTGCACATTAAGCTCTCATTTCTTTTTAC
TATCTGTTAACTTTTCATTTGAGGCCGATTTTAGCAAACTGTTGATCTTATACTGAATAC
CTGCCATTCCAGAGGGCTACTATCAAAGTTGACGGTGAGTATGCATTTGGATATGCCAAA
TCTGAAATAGGAGTTCACAGATTAGTGCGGATTTCTCCATTTGACAGTGGAAAGCGGCGG
CACACTTCCTTTGCTGCTGTCGCTGTAATACCTATTCTTGGTGAGTCCTCTAGCCGATAC
CAGATAAATGAATCGGATCTTCGGATAGAACGCTTCCGTTCTGGTGGACCCGGCGGCCAG
CATGCCAACACCACAGAAAGTGCTGTTAGAATTGTGCACATCCCAACTGGTACAACGGCA
ACTTGTCAAAATGAAAGGTCACAACATATGAATAGGGCATCAGCAATGGCTGTGCTGCAA
TCTAGATTGGACCAGCTTGAGATTACCCGTCAAGCACAGATGAATGCAGAGCACACGCAA
TCACTCTCTGAAATAAGCTGGGGAAACCAAATAAGATCGTATGTGCTACAGCCATACCGA
ATGGTCAAAGATCTCCGGACAAACTATGAAGTGTCTGATCCCGATTCAGTCCTGGAAGGC
GACCTAGATGATTTCATACTGAGTTTTTTGTCATTATCATTGGATAAAGTTGATGAAAGT
GTCTGAAGAAAAACCATGTCTATCATTTATTATCAGCACGAGCAGACTGTGACAGTGCCC
AACTAACAGTAAGAGAGGTTTTCTTTACTACTCTGACAAATACAACGGACACCTCGATCT
CGAGTGGCGCGAAAGGTGCGGAATAACTGTGAAATGCAAAAAACCAGAGCTAGTTTCCTA
GTACGAATGTTTTAGTCGATCTTGGTAGTTAGAGAAGGTAATGTAACGGAAATGTTTTTA
TTAGAGAGGCAATATAATGAAACTATGATCGATCGTTGACCTATATTTTCATTTATATAT
TACTGTTGCAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_54120.5	2025	0.0	24 - 1286	99	1262 / 1263	CUST_19976_PI390587928 CUST_17485_PI390587928	ABC17141 ABC38861
MLOC_54119.2	3575	0.0	1710 - 2797	100	1088 / 1088	CUST_17485_PI390587928 CUST_19976_PI390587928	ABC17141 ABC19112 ABC38861
MLOC_54120.1	3759	2e-67	2861 - 3000	100	140 / 140	CUST_17485_PI390587928 CUST_19976_PI390587928	ABC17141 ABC19112 ABC38861
MLOC_54120.2	3757	2e-67	2861 - 3000	100	140 / 140	CUST_19976_PI390587928 CUST_17485_PI390587928	ABC17141 ABC19112 ABC38861
MLOC_54120.3	2813	2e-67	1947 - 2086	100	140 / 140	CUST_17485_PI390587928 CUST_19976_PI390587928	ABC17141 ABC19112 ABC38861
MLOC_54120.4	1567	2e-67	689 - 828	100	140 / 140	CUST_19976_PI390587928 CUST_17485_PI390587928	ABC17141 ABC38861