barSeed - Barley Seed Development Database

Probe ABC17101

Source Contig ABC17101

barSeed

Links

Affymetrix Source Sequence (945 bp)

>ABC17101 945
CGGCCAAATCCGGCCAGTCCATGCCTTGCTAACCTTTACCGGCACCCTCTCCTTTCCCTA
TACCGATTCCACGGCGTCGATTCGCAGCCCCCACCACAAACCCTGGCGACCAGAAGCCAG
AGCAGGAGGAGAAAATTTTAATCTTTGCACCCATGGATGGCGGCGGCGCGGCAGCGAGTG
GTGGTGATGCACGAAGCCGTTGTGGGATCCAGCGGCCACGGCCCACAAGGACGTCGGCGA
GCAGGCCGCGGGTCCACGGGCGCGAGACGCAGAAGTACGTCCTCGGGCCTGCAGGACCGT
CGACAAGCCCGTGCGGGAGCGCCGCTACTTCTGGCGTCGTCTTCTTCCTTGCTTGCTCTG
CTCTCATCTCTGCTCCTTGCCATGAGGTCTGAAGCGCTTCTCCGGCTCAACAAACTAGAA
GAGGTGATTCATATGTACGGGTTTGCTGAAATTGGACAGTGCATCTCTATCTTCAATGTC
CACCAAACTGTCAGGCATGGTAGCTGATTCATATGTACATGTTGTCCAAGCCCTGCACTG
CGTCCACCTCAACGAATGTCGACGACCAAGAGCTGCTGGCATTGGTCCTGTCTTAAGGAA
CTGCTCACTCGAGTCGATGTTGACGCTGCATCAGGGGAAATATTCAGAGATCAGCAGAGG
TCAATGAACGGCTTCATGGAGTGGACAGAGATGGTGTGTCGGTCAGTCACTCACTAGGTG
CAGTCTAAGGCTGAAATTGATTTCTCTTTTGCAAGCGGCGTTGGTAGCCCTTCCGAGCCA
AGAGCCTTAGACATCAAGTCTGGTGTACATTTTTGTTTAACTAAACGTTGCTGGACCTGT
GTAACTCGATGTAAACTGGTAGATGTAAGATGTGTGAAACTGGTAGAGCAAGTGTAAATG
TCTGTAAACAATCAGTATTGTACCCTGTCTAGATATAAAGTGTAC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_74133.2	1050	0.0	82 - 1026	100	945 / 945	None	ABC17101
MLOC_74133.1	938	0.0	530 - 938	100	409 / 409	None	ABC17101
MLOC_74134.1	913	0.0	517 - 913	100	397 / 397	None	ABC17101
MLOC_74134.2	887	0.0	94 - 465	100	372 / 372	None	ABC17101
AK363231	3024	2e-66	1280 - 1445	95	158 / 167	CUST_21975_PI390587928 CUST_15936_PI390587928 CUST_21958_PI390587928	ABC14590 ABC17101 ABC31860 ABC33337
MLOC_40238.2	2254	2e-66	496 - 661	95	158 / 167	CUST_15936_PI390587928 CUST_21958_PI390587928	ABC14590 ABC17101 ABC31860 ABC33337
MLOC_78764.1	7911	8e-60	219 - 361	96	140 / 146	CUST_9071_PI390587928 CUST_9219_PI390587928	ABC17101