barSeed - Barley Seed Development Database

Probe ABC16647

Source Contig ABC16647

barSeed

Links

Affymetrix Source Sequence (672 bp)

>ABC16647 672
CCCGAATCCTCTGCTGCCGGAAACGAGATCGCCGCCAACCTCCTCCGTCCCTCCGCTCCG
GAAAGGAGCTCCGAGCTCGTCCCCGACCCCGCGCTCCCGTCTCCGTTCCGCCGTCGTCGT
CGACACCTCTGTTCAGCCGCCGCCGACCTCTGCACCCGAATCCAACCTGTGCCCCCGCCG
TCAACCTCCCCTCCAGCGGCACGAGTAAAGGAAGATGCCTTCACTTCAAATGGCTTTACC
TCCAGAACTTGCTGATAATGCGCTCAGATTATTCCGCGAGTGCTTAAGGAGGGCTAAGTT
CATTGGTAATCAGCAACACAACACGGGGCTTCTCGTTAACATGGTGAGGCAGCAGTTCAA
GAAAAACATGCATGAGACTGATCCAGAGAAGATACAGAAAATGAAGGACGACGCGGCGAG
GGGCCTTATCAATCACATCATATACGAGTCCGAGAAGATGACGGGGCGCAAGTTCTCAGG
TTAAGACAGATGAGAGTGGAGTCTCACCGTATGCTGTCTGCACGATGTAGGACCAGCTAA
TGATCTGCTTGGTTNTATACTCATTAAGACGGTGAAATTTTTATTTACTTTTTGCATTTT
CCTGTGGTTCCGGATGTAGTAATTGACCTACACAACACATGGTAAGTGGCCTGCTAAAAA
AAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_65180.1	730	0.0	1 - 652	99	647 / 653	None	ABC12517 ABC16647 ABC26243
AK371839	768	0.0	39 - 701	97	644 / 664	CUST_17610_PI390587928	ABC12517 ABC16647 ABC26243
AK357703	619	1e-105	83 - 377	90	266 / 295	CUST_18124_PI390587928 CUST_35933_PI390587928	ABC12517 ABC16647 ABC26243
AK252842.1	534	3e-77	75 - 306	89	208 / 233	CUST_18124_PI390587928 CUST_35933_PI390587928	ABC12517 ABC16647 ABC26243