barSeed - Barley Seed Development Database

Probe ABC16617

Source Contig ABC16617

barSeed

Links

Affymetrix Source Sequence (1255 bp)

>ABC16617 1255
GCACCCGTCCACCCCCCAGCGTATTCCGCAGCCGCCGCCCCGCGCCCTTGCCGCCGTTGC
CAGCCTAATCTTTTGGCAACACACACAGAGCTGCCACACGCCATGGAGGAGACGAAACCC
ACCCCCGCACCCCCCCTCTTCTCCTTCTCCAACCCCAGCGGCTCCTTCGGGTTCGGGTTT
GGCGCCGCTCCCGGCCCTCCCCCTCCGCCTCCGCCGCCAGCTGTCGAGGTCCTCCTCTCC
GAGGAATCGCCCATCGCGGCCGGCAACTTGGAGCCTGTGGTGGTTGACGACTCCCTATCG
ATTTACAAGGGAAGAGTTAACACCTCTGATGTTTTCGGGGTAAAAAACTCTGATTTGGTT
CCAGGAAAATATGAAGGTGGGTTGAAGCTGTGGGAAGGATCATTGGACTTGGTGAAAACC
CTAAATTCAGACATCAAAGATGATCGACTGCTTATAGAAGGCAAACACATACTAGAGTTA
GGATGTGGACATGGCCTCCCTGGTATCTATGCCGCTCTGAAGGGTGCTGGTCTAGTTCAC
TTTCAGGATTTCAATGCTGAGGTTCTTAGGTGCCTTACCATCCCAAATGTAAAAGCTAAT
CTGTTCAAGGAATCATCTCAAGGAACATTCACATCTAGGAGTGTTGGTTTTTATGCTGGT
GATTGGGGTGAAATCGACAAGTTACTTCTTCGCGGAGATGCTGTCCAGGATAAAACAACC
AATCTTCAAACAGAAAATGAAGGGTATAGAGGTTATGATATCATCCTGATGGCTGAGACT
GTTTATGCATTGGATTCACTTCCTAGTCTCTACAGGCTCATCAAGAAGTGCTTACACTAC
CCTAGTGGTGTAGTTTATATGGCAGGGAAAAAGCATTACTTTGGTGTAGGTGGTGGCACA
AGGCAATTTCTACGCTTGGTTACAGAAGATGGTGCCCTGCAGTCGGACCTGCTTGCTGAA
GTTACTGATGGATCATCCAATGTTAGGGAGGTTTGGAAATTCTCATTCAAGTAGACTAGC
ATAGCCTCTGTAATTGTTGTATCAGATACAAACGTGTACTTGGCTCTATACTGGTAGAGT
GTCAGCCTTGGTTTAGTCGTTTCATGGTGTTTTAATGCACTGTTAGTTTCACTTTCAAGT
TGACTGTTTATGAGCTCTTATTCCGATAAGAAGCCCATGTTTTACTCTTGAGAAGTCATA
CAAATACTTGAGTCCTCCTATCTCTGAATTACGACTCTTAAACCCGGTGACCCTT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK250253.1	1122	0.0	2 - 1122	100	1121 / 1121	None	ABC16617
AK251831.1	2207	0.0	2 - 1181	98	1178 / 1204	CUST_41355_PI390587928	ABC16617
MLOC_69565.1	2532	0.0	1087 - 2042	99	953 / 956	CUST_41355_PI390587928	ABC16617
MLOC_69565.2	1903	0.0	331 - 1277	99	946 / 947	CUST_41355_PI390587928	ABC16617
MLOC_50838.1	433	2e-132	168 - 433	99	263 / 266	None	ABC16617