barSeed - Barley Seed Development Database

Probe ABC16347

Source Contig ABC16347

barSeed

Links

Affymetrix Source Sequence (739 bp)

>ABC16347 739
ACTATAACTTGGTTATGTACTACGCGGCAGAGAAGCCAGTGAACAAAGGATCTCTCTTGG
GTAGATTCATTGATGGAACTGATGCATTCCGAGATGCCAGATTTAAGCTTATACCAAGTA
TTGTTGAGGGTTATTGGATGGTAAAGCGTGCAGTTGGGACGAGAGCTTGCCTTCTGGGGA
AAGCAGTAACATGCAATTATCTTCGGCAGGATAACTTTCTCGAGATAGATGTTGACATTG
GTTCCTCTTCTGTTGCACGGAGCATTATTGGCCTAGTCCTGGGATATGTGACAAGCATCG
TTGTTGATCTTGCTATTCTAGTTGAGGCAAAGGAAGAGAAAGAGCTGCCTGAGTACATTC
TTGGCACTGTTCGTCTTAACCGTGTAAATCCTGAGGCTGCTGTACCAATCTGAGTTAATT
CCATTTCCCCACCCCTTCTCCTACACAAGAGATGGTGGTTGGATCTGCACAATTTTTTAC
CATCATCTTCAGTTTTCGGAGGTGCACATTTAAAAGAAGGAAACCATGGTCACTATGTAA
TAATCCCAGGTCAAGATCTGTGTCACACCACATGTATAGAGTACAGAAGTGGTGCCTATC
GTAAATGGAAGAATACTAGAAATACTATATTGTCATGGAAGAACTGTATTGCCTAATGAC
ACATATGACCGAGCAAATAAACATGGAAAGGTCGGTTTTAAAAAAAAAAAAAAAAAACTC
GACTTTGGATCCACTAGTG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK248279.1	2729	0.0	2056 - 2729	100	674 / 674	CUST_41440_PI390587928 CUST_5797_PI390587928	ABC16347
MLOC_13315.1	696	0.0	135 - 516	99	381 / 382	CUST_41441_PI390587928	ABC16347
MLOC_13725.1	557	1e-141	285 - 557	100	273 / 273	None	ABC16347