barSeed - Barley Seed Development Database

Probe ABC16221

Source Contig ABC16221

barSeed

Links

Affymetrix Source Sequence (891 bp)

>ABC16221 891
TCCGCTTCTTCACCGTGTACGGGCCCTGGGGCCGCCCCGACATGGCCTACTTCTCCTTCG
CACGCAGCATCGTCGCCGGCGAGCCCATCACGCTCTACGCCGACGCGCGCCGCGACTTCA
CCTACATCGACGACGTCGTCAAGGGCTGCGTCGGCGCGCTCGACACCGCCGGCAGGAGCA
CCGGGTCCGCCAGGTCGGGAAAGAAGAGCGGCCCCGCGCCGCTGCGCGTGTACAACCTGG
GCAACACCTCCCCGGTGGCGGTGACACGGATGGTGGCCATCCTGGAGAAGCTGCTGGGGA
AGAAGGCGAACAAGCGCGTCATCGCCATGCCCAGCAACGGCGACGTGCCCTTCACCCACG
CCAACGTGAGCCACGCGGCGCACGACTTCGGGTACCGCCCCCACCACCTCCCTCGACGCC
GGCCTGCGCCACTTCGTGGACTGGTTCGTGCACTACTACAATCTCGACATCAAGATCGCC
AAACCCGCCACCAGCACCAGCAAGAAGCCGGCGGCGGCGTCGACGAAGAAGAAGGGCTCG
GCCACGTCGTCGTCGGCGGCGTCGTCGTGAGCAGGGCAGAGCACCAGCCAGCGCCCGGCC
AGCCCGCGAGAGATGGAGCACCGCCACCGACACCGACACCAAGTGTTTATTCCTTCCCTA
GCTAATTCTTGGAGGCATCAACTTGTCTTTCATCGTCTGTAATAACCGTGTAAGCGTCGT
AGTTAGCAAATAATGGTGGGAATTGAACAGCAAGGGATAGGACGCAAAAAACTGCAGATA
ACTATTGTATTAGATGGGGGTATAGTCAGAACAAGAAGAGGGGAGCCAGGACTGAAGAAA
GATGGTTTCTTTTCCAATCAAAATCTTTTTTTCCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_71845.1	1914	0.0	995 - 1869	99	869 / 876	CUST_40803_PI390587928	ABC16001 ABC16221
AK368112	1828	0.0	969 - 1828	99	853 / 861	CUST_40803_PI390587928	ABC16001 ABC16221
AK354984	2214	2e-129	1074 - 1552	85	409 / 483	CUST_4553_PI390587928	ABC16221
MLOC_13622.1	1609	2e-129	398 - 876	85	409 / 483	None	ABC16221
AK357589	1944	2e-65	1073 - 1503	78	347 / 444	CUST_112_PI415269222 CUST_12137_PI390587928	ABC16001 ABC16221
MLOC_65544.2	2927	1e-63	1140 - 1570	78	345 / 443	CUST_112_PI415269222 CUST_12137_PI390587928	ABC16001 ABC16221
MLOC_65544.1	2099	1e-63	969 - 1399	78	345 / 443	CUST_12137_PI390587928 CUST_112_PI415269222	ABC16001 ABC16221