barSeed - Barley Seed Development Database

Probe ABC16122

Source Contig ABC16122

barSeed

Links

Affymetrix Source Sequence (983 bp)

>ABC16122 983
CGATCTGCCTAATAACTATGCGGAGACAAATGCTTCATTTAGTTCAGACGAGCAACTCAT
TTTTACAGGAACCTCTGTTGAGAAAGATGGCAGAAATGGAGGCCTACTTTGCTTCTTTGA
TAGAAGGAAACTAGAGCTTGTATCAAGGGTGGGAATTTCACCACATTACAGCGTGATAAG
GTCGCTCTGGCATCCAAGGATTAATCAGGTGTTCGCAACAGTTGGGGACAAGAAGGAAGG
TGGGACTCATATCTTGTACGATCCTTCTGTTAGTCAGAGGGGAGCTCTTGTGTGTGTTGG
ACGAGCACCAAGGAAACAATCTGTTGATGATTATGAGGTGCAACCTTTAATACACAATCC
ACATGCACTGCCTCTATTCAGAGATCAACCAAGCCGTAAACGCCAAAGAGAGAAGATGAT
GAAAGACCCCCTCAAATCACACAAACCAGAAGCACCTGTTAGTGGTCCAGGGTTTGGTGG
TAAAATTGGCACGACAAAAGGCAGCTTGCTGACACAGTATCTCATGAAGGAGGGTGGTTT
AATTAAGGAGACATGGATGGATGAAGATCCAAGAGAAGCAATTTTGAAATATGCGGATGC
TGCAAAGAATGACCCAAAGTTTATTGCGCCAGCATATGCTCAAACTCAGCCGGAAACAGT
CTTCGCAGAGTCTGATTCCGACGGTGAAGAGAAAAAATAACATGTGGATGTAAGCTGTTT
TGTTTTATTTTAGTAAAATGAGATTTGACACAAGAATGTTCTGTTTTCTGACAGAGTGAA
TCTAACGCAGTGACCATCAAGTTTCTTGCATGAGTCCTGCAACATGTACTTTTACTGAGG
AGAAACTATAGAATGCGGTAAGTGTCGAATACGATGGTACCCCAGCATGTCTTCTCAGTT
CCGAGTGTTATATCTGTATGTATGTTGGTAGGTTTATGCAATTGTACTCCCTCCGTAACA
AAATATAAGTCGTTTTTTAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_6823.3	2324	0.0	306 - 1284	100	979 / 979	CUST_13937_PI390587928	ABC16122
MLOC_6823.8	2393	0.0	49 - 1027	100	979 / 979	CUST_12886_PI390587928 CUST_13937_PI390587928	ABC16122
AK364497	2132	0.0	1255 - 2132	100	878 / 878	CUST_19797_PI390587928	ABC16122
MLOC_6823.4	1785	0.0	306 - 1163	100	858 / 858	CUST_12886_PI390587928	ABC16122
MLOC_6823.7	943	0.0	50 - 906	100	857 / 857	None	ABC16122
MLOC_6823.6	1408	0.0	303 - 1159	100	857 / 857	None	ABC16122
MLOC_6823.1	1301	0.0	315 - 1023	100	709 / 709	None	ABC16122
MLOC_6823.5	2395	8e-95	1015 - 1203	100	189 / 189	CUST_12886_PI390587928 CUST_13937_PI390587928	ABC16122
MLOC_6823.2	1359	0.0	315 - 1023	100	709 / 709	None	ABC16122