barSeed - Barley Seed Development Database

Probe ABC15830

Source Contig ABC15830

barSeed

Links

Affymetrix Source Sequence (1116 bp)

>ABC15830 1116
GACTTATGAAAATTGATTATCAGAAGAAGGTTGATCTATTGCATAAACAAAAGAAACGTG
GTGTTAAACTTGAAACTCTTGAGAAGACAAAGGCCGCCGTTAGCCACTTGCACACAAGCA
TGGCAAACATGTGGAGTTCTATGCACCGTCAACACAAGAGCCAGTTTTTGATCATATCGG
GGATCAGAGCTTTTGAGGTACCGCCTGTTCCAAGGGAGACAACTGATTTGCATTATAAGC
AGACCTGTGAGCTACGTGACATTGTCAGGGAGTGGCATATGCAGTTTGAGAAACTTATGG
ACCATCAAAAAGGGTACATCAGAGCACTCAATGCATGGTTGAAGCTTAATCTCATCTCCA
TCGAGAGCAATCTGAAGGAGAAAGTATCCTCCCCTCCAAGGCAGGTGGAACCACCTATCA
AGAATCTGCTATATGCCTGGCACGACCAGCTTGAGAGGCTTCCTGTTGAACTTGCCAAAA
CTGCCATTAAAAGCTTTACTGAAGTCATAAGCAATATTGTACTGCTTCAGGAAGAGGAAG
TCAGCCTAAGGCGGAGGTGTGAGGAAACTCGCAGGGATCTTGACCGTAAGAGGGCACAGT
TTGAAGACTGGCATCGTAGGTACACAGAAAGAAAGGCATCCCAGGGTGAGGAAGCTAACC
CCGAAGCAGCCAATACTTCTAGCCTAGATCATGTCAATGAGAGGAGGATAGCCATTGAGG
AAGTAGAGATCAGGTTGAAGGAAGAGGAGAGGCTCCACCTTAGGCTTGCGAGGCAGGTGA
GGGAGAAGACGCTTGCAAACCTCCGGATGCACCTGCCAGAGCTCTTCAGAAACATGACGG
ACTTTTCGTTCTTCTGCCATGACATGTACAGTAGCTTGAGAAAATCTGCAGTGCTGCAAA
TGCCCAGAGACGAGTTTCAAGGTTGATGTCTTGTGCGTGTTAGTGTTACTGTAATTTACC
TGCCACCAGAGGCAGGCAAATATTTATTTTGGTTGTAGTTGTTTGCTTGCCATTTCTAAA
CTGCGAGGCTGCTCTGAATATGTATGTTCCAAGTGCACTGTAGAGGTCAGCCAGCAATGA
CGATCTGATTAATACCGTCTAAATTGAGATCATCCC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_55471.1	1702	0.0	459 - 1458	100	1000 / 1000	CUST_24174_PI390587928	ABC15830
AK363508	2764	1e-54	1524 - 1640	100	117 / 117	CUST_24174_PI390587928 CUST_14140_PI390587928	ABC15830
MLOC_55471.3	1301	0.0	234 - 1183	100	950 / 950	None	ABC15830
MLOC_55471.4	1138	0.0	215 - 1020	100	806 / 806	None	ABC15830
MLOC_55471.2	1098	0.0	286 - 1091	100	806 / 806	None	ABC15830
MLOC_75868.1	1348	1e-54	1131 - 1247	100	117 / 117	None	ABC15830