barSeed - Barley Seed Development Database

Probe ABC15529

Source Contig ABC15529

barSeed

Links

Affymetrix Source Sequence (1160 bp)

>ABC15529 1160
GATTGATGCTAATAGAGCTTTATTGAAGTACCGATTACCTTTGAGGGAGATCATTGTGGA
CTTCTACAATGAGTTGAAAAGCATAACATCTGGCTATGCTACTTTTGACTATGAAGATTC
TGAGTATCAAAAATCTGATCTTGTTAAGATGGATATTCTACTTAACGGCCAGCCTGTTGA
TGCTATGGCCACTATAATCCATAACCAAAAAGCTCAGAAGGTTGGAAGAGAATTAGTGGA
TAAGCTCAAGAAATTTATAGAAAGGCAAATGTTTGAGATCACTATACAAGCAGCAATTGG
TTCAAAGGTTATTGCAAGGGAAACTCTGTCAGCAATGAGAAAGAACGTTCTGGCCAAGTG
CTATGGTGGTGATATCACCCGCAAAAAGAAGCTGCTAGAGAAGCAGAAGGAAGGGAAGAA
GCGCATGAAACGTGTTGGATCCGTCGATATTCCCCAAGAGGCATTCCACGAGCTACTCAA
GGTCTCCAGTTCAAAGTAAACAGCCGTATTTTAGCATTGTAGCCTCAGTGTACCTGGAAG
GTCTTCATCCTAGTTAAGTGGGTACGTACTGTCGAAGAGTGTACTCTACCATTTTGCGGG
TTGCGCCTTTGCCATTGTTGTGCTGGAGCCAATGGTGAAACATTGGTCCAGAAGTGCTTA
GTTCACCGCGAGAAGTTTCACCTTCGGTGGCGCTTTTTGTTTTAATTGTGTCTAGAACAT
ACACACCCTGGACCCTGGCACAGAAGAACCTTCACCACCACACGCTGACCCCGAGTGAGA
AATGGATAACGTGTGGCATCGCCGGCTGGTTCATTGTTGGTGCGATCACACGCCTGGTGC
CGTGCTTTACTGCACAGTTTTTTTGGAAGCAGACCAGCAAACAATGCTGCTAACAGTTTG
TGTTTATTGAAACTTCTGTGCACGGCAAAACAGTGGCTTAGATCATACTCATACTTTGTT
CTTTTTTATTACGGAGATCGTTCCTATAGCTCTACCTATAGCTCTACGTTTTTCTTTTTT
ACTTTTTGAGGTTTCCTATAGTTCTCCTTTGTATCTTTCTGGAAATGGAATAATATGGAA
CAAGTGGGGTTGCCCTCCCAAGTTTAGGGGTGCATTTTCCGTGCTTCTATTTTTGTCGAA
TGATGCGGCATCGCTGAATA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK368045	2750	0.0	1574 - 2732	99	1158 / 1159	CUST_38136_PI390587928 CUST_6311_PI390587928	ABC15529
MLOC_53895.2	1396	0.0	1 - 1154	99	1153 / 1154	CUST_6311_PI390587928	ABC15529
MLOC_53895.3	1427	0.0	1 - 1147	99	1146 / 1147	None	ABC15529
MLOC_53895.4	1901	0.0	1 - 1042	100	1042 / 1042	None	ABC15529
MLOC_53895.1	1233	7e-111	814 - 1031	100	218 / 218	CUST_6311_PI390587928	ABC15529