barSeed - Barley Seed Development Database

Probe ABC15354

Source Contig ABC15354

barSeed

Links

Affymetrix Source Sequence (741 bp)

>ABC15354 741
GTGACGGATGTGGTGCTTTCCATATCTTCCCTGAATGTGATCTGAGCTGGACCCTATTTA
TCCTTGAAGCCGCACCTGCCCTACAGAAGTTTACATTATCTCGAAGTCGGCATGCATGTG
CCATAGGGTATGAGGATAATGCCGAGAAGCCCAACGTGGTGTGGGAACCATCCAAGGATT
TGAAGCACCTGAATTTGAAGTTGCTCTGGATGTACGGTTTCGAGGAGGAAGACAAAGTGA
CAAACTACATAAGGCTAGTCATGGAGCGAGCTGTGGGGTTGAGGAGAATCGAGCTGCGTG
GTGAAAACTCATGCAAGGAATGCGATGTCATTGACCCGAGGAGATCCCAGGTGGATGAAG
ATCGGAGGTGTCGGATCAAGGAGCGACTCACAGATGGATCCCCTTCATCCTTGGAGATAA
TAATGTGCTGACGGATATTCTCAAGGAATACTATGTCTCATCATGCTTCTAGCTGCTTCT
CAGCGCACCATCTCTGCTCATGACTGATGGCAACCACTTAGTTAGCTTAGTTCTGGAGCT
CAATTACCACTGCATGGCGTCATGTTTAGTACTCCCTCTGTCCCACGTTTTCTGACATTA
CACTAGTATGTGACGTGTTTTTTCTGTTTTACGTATGCATTAGCGTTCGTCCTGCTTTAG
ATATCCTTTGTCACTTCTATGTTATCTCTGTTGAAAGTCGCAGCATGTTTACCGTATCCT
ATTACAAGCTACCATTTTGCA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_7632.3	2086	0.0	1 - 714	99	709 / 714	None	ABC15354
MLOC_7632.1	813	0.0	1 - 645	99	641 / 646	CUST_27570_PI390587928	ABC15354
MLOC_7632.2	2256	0.0	1 - 621	99	617 / 621	None	ABC15354
AK375294	2791	4e-67	2236 - 2556	81	261 / 321	CUST_11257_PI390587928 CUST_25694_PI390587928	ABC12619 ABC15354 ABC17993