barSeed - Barley Seed Development Database

Probe ABC15014

Source Contig ABC15014

barSeed

Links

Affymetrix Source Sequence (720 bp)

>ABC15014 720
CGTTCCTCCAGGTGGTCGGCTCGCCGCCTCCCCTTGGCCCCCCGCCGCGCCGCGTGTCCC
GCCGCTTCTCCTCCCTCTCCTCCTCCTCCCCCCTGGCTCTGTCCGCCTCCCCGCTGCCGT
GCCCGTGATATAGCCACGGGCTTTCTCCGAGAAGAGCGCATCGCAGGCGAGCGCGCGAGG
GGTCGGGGAAGGGAAGAGGATGTCGCTGGGGGCGGTGTTCCACGGCGCGCAGCTGTTGCT
GGATCTGGCGGTGGCCGGGCTGTCGCTGATGTTCGCGCTCGGCCTCTTCGCCGTCGTCAC
CACCGTGCTCTGCTCCGCCGCCTTCCTCCACCACTCCAAGCCCATCGCGTCGTAGCCGCG
AGCCGCCTCCCGCCAAGTCCACGGCCCCCTCGGCGCATCCTAATCGAATGAGATTGCTGT
TGGGAGGTAATACCTTCTTGTGCACCATTTGTCCAGCAGAAGGTGCTCCATCTGACGCTG
CTTCTGCTTTTAGGGAAGTACTGTAGACGCAAAGAGTAGGAATTGCACATATCAGGTGAT
AGCTGGAGGCTCTTGTACCTTGTATTACTTGTCATGTCTACTTAAGCTGTTCTGTAAACT
ACACTTGTTTGTGCAGTAAATTGTTGGTTCATCTTCTTGAAATCTTCTACATCTTATTGT
TTATAAATGTACTGTACATTGTCTAATGCTTCTTATATGGAAAGGCCGGATATTCCTAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_63720.2	1702	0.0	1 - 718	100	718 / 718	CUST_4639_PI390587928	ABC15014
MLOC_63721.3	1955	0.0	71 - 788	100	718 / 718	CUST_4639_PI390587928	ABC15014
MLOC_63721.5	1359	0.0	1 - 535	100	535 / 535	None	ABC15014
MLOC_63721.4	1897	0.0	55 - 589	100	535 / 535	None	ABC15014
MLOC_63721.1	2882	0.0	142 - 547	100	406 / 406	CUST_4513_PI390587928	ABC15014
MLOC_63721.2	3730	7e-164	1577 - 1889	100	313 / 313	CUST_4639_PI390587928 CUST_4513_PI390587928	ABC15014
MLOC_63721.6	2389	4e-62	1436 - 1565	100	130 / 130	CUST_4513_PI390587928	ABC15014
MLOC_63720.1	825	0.0	71 - 475	100	405 / 405	None	ABC15014
MLOC_63720.3	993	0.0	3 - 377	100	375 / 375	None	ABC15014