barSeed - Barley Seed Development Database

Probe ABC15000

Source Contig ABC15000

barSeed

Links

Affymetrix Source Sequence (1254 bp)

>ABC15000 1254
GTCCCCCGGGCTGCAGGAAAAACGATGCGACAAATGAGCCTCTTTTGTCTGGACCATACT
GGATAATGGTTAACATCAGCAAACAAAAGGGTACATGTGGATGTGGATCCAAAGCAAATT
AAACATATATTGGTTTGACCAAAACTAAGGAGGTCGCACGGCCCAGTTTTGTTGTGATTT
TTCCAAGATATTTGTCAAGTAGCTCCTGGATTGGAAACTGTGTCATGCTTCTGACTTGAT
AAAAATGTTATCAAAATTAGACTCCAAATGCAGCTTGCTGGGCAAAGAGGAAATTTAGTT
GGGATGAAAGGGAAGGGCCTCGATCACTCTACCTGGGATTTGCACCAGCATTGACTAGAT
CCCTCATCTATGGTGGCCTTCGATTAGGACTGTATGAGCCTTGCAAACATGTCTGCAGCT
ATGCATTTGGTTCAACAAACTTTGCTTTTAAATTTGCATCTGGAGTAGTTGCTGGTGCCC
TAGCAACTGCATTGACAAATCCTATGGAGGTTTTAAAGGTGAGGTCACAGATGAGTACAA
GCAGAATTAGTACAATTGGAGTGATGAAGGAAATTGTATCAGAGGAAGGAGTCAAAGCGC
TTTGGAAAGGAGTTGGCCCAGCCATGGTGAGAGCAGGCTGCCTCACGGCATCACAAATGG
CAACTTATGATGAGGCCAAACAGGTCTTGCTGATGTGGACACCATTTGAAGAAGGTCGAG
TTGCATCGCTGGAACGGCTGGTACACTTGTGACTGCACCTATTGACATGATCAAAACAAG
GCTAATGCTGCAACGAGAGTCCAAAGGTGCCAGAGTATACAGGAACGGTTTCCACTGTGC
GTACCAGGTTGTCCTGACGGAGGGTGTAAAATCACTTTATAAAGGTGGGTTTGCCACCTT
CGCAAGGTTAGGCCCTCAAACAGCAATCACTTTCGTCGCGTGCGAGAAGCTGCGCGAACT
CGCTGGAATGTCTGCTATCTAGTACCACGTGAGATTGAAGAAATATACGGTTCAATATTT
GTCTAGTTGGAGGGCATATTTTACTCCATTCATTTATCAGCAGTTTTCCACATTCATGAG
GGTCTGTCAGAATTGTAGCACTGACTTTTGAAAGGATAAAGAAATTGGGCTGCTTCAATG
GTTAGCTTGTAGTACTTGCTACCGATCAGATTTTCTCTTCAGGTCACGAAGTAGCAAGGA
CAGAATAATACTGTAGTACTCTCCATTTTTGATTTTCAGCCTGAGCTTCGCATT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_12056.4	1467	0.0	1 - 929	99	928 / 929	CUST_9995_PI390587928	ABC15000
MLOC_12056.8	1529	0.0	1 - 922	99	921 / 922	CUST_9995_PI390587928	ABC15000
MLOC_12056.2	2715	1e-113	1178 - 1407	99	228 / 230	CUST_9995_PI390587928	ABC15000
MLOC_12056.6	1499	0.0	1 - 949	98	928 / 949	CUST_9995_PI390587928	ABC15000
MLOC_12056.7	1627	0.0	1 - 941	98	921 / 941	CUST_9995_PI390587928	ABC15000
MLOC_12056.9	1548	0.0	1 - 941	98	921 / 941	CUST_9995_PI390587928	ABC15000
MLOC_12056.1	1610	0.0	695 - 1105	99	410 / 411	CUST_2046_PI390587928 CUST_9995_PI390587928	ABC15000
MLOC_12056.5	2549	1e-113	1111 - 1340	99	228 / 230	CUST_9995_PI390587928	ABC15000
MLOC_12056.10	1521	0.0	501 - 881	100	381 / 381	CUST_9995_PI390587928	ABC15000
MLOC_12056.3	1916	4e-109	1243 - 1457	100	215 / 215	CUST_9995_PI390587928	ABC15000