barSeed - Barley Seed Development Database

Probe ABC14979

Source Contig ABC14979

barSeed

barSeed Home
List Cluster Sets
List Cell Wall Probes

Links

James Hutton Institute Home
BioSS Home

Affymetrix Source Sequence (501 bp)

>ABC14979 501
GGAGGACCATGCTGATTACTCTTCTCGTTGTTTTGCTCGCCTTTTCAGGCCCAATCAAAG
GAGAAGATCAGTTGGGAAGAGGTGATGGCGGTGACTTGGCCCCTCCTTCGGATCCAGGGA
GCAGTCACTTGGCTCCTCCTCCACCTCCTCCATCTCGAAAGATCAATCCACCTCCACCTC
CAAAGACAGATTTGCCTCCTCCTCCACCTCCACCTCCAAAGACTGATCTTACCCAGCAGC
CGCCTTCAGGATCATGTGTGGAAGTGAAGTTGTACAGAGGGCCGTGCATCAACATGCTTT
GCGCTGGTGCATGTATCGCACAGTTGCATCAGGGCGGCCACTGTCGTGGGAGTATTTTTA
CTGGTGGTTGCTATTGTTTCGTGTGTTCCATAACAAAGTCTAGTCCGTCATTACATTGAT
GTGGAACATGCAGAATGTGGCTTGAGTTTTTTATTGGTTCAATCCAACAATAAAGGATGT
GCTTCTTATTAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_51430.1	956	0.0	198 - 639	98	436 / 445	CUST_4716_PI390587928	ABC14979
MLOC_51430.2	509	0.0	4 - 407	99	401 / 407	None	ABC14979