barSeed - Barley Seed Development Database

Probe ABC14947

Source Contig ABC14947

barSeed

Links

Affymetrix Source Sequence (581 bp)

>ABC14947 581
GATTTCGCTTTGGACAACACACTTCTTAGCGGGCCGACCGCAATGGCAACGCCGCCGCCG
CCAGCGTTCGTGTACCGGATCAGCACGGGGGGCGAGTGGGCGGAGCTCCAGCGCACCGGC
GGCACCCTCGGCGGCGACCTCGACCGCTCCACCGGCTGCTTCCACCTCAGCGACCTCGCC
CAGGTGAAGATGACACTGAAGAATTATTTCCGTGGGCAAAATGATCTGTACCTGCTACAA
ATTGACACTGCCAAGATTGCAGATGGCTTAATTTATGAGGCAGCTGATGGCTGTAACTAT
TTTCCTCATTTCTATGGCCCTGATCGGAGCTTTGCACCCCTTCAACTAAGTGCTGTTGTC
AAGGCAGACAAAATAGAGCTGACGAACAATGATTTTACTTGCAGTCTACTTGATGGAGCA
CCCATCTAATTCTAATGTGTAACTGTAAGGTTTCACCCTTGGCCCTTGTTTCCATAATTT
CCTTGTAAGTTCCTTGCCAAATTTATTGAAGAGAGGTTGTCCACATGCTTATGCTAGTAA
TGGAAAGTACACAAATTTAATGTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK357466	636	0.0	92 - 636	99	537 / 545	CUST_4620_PI390587928	ABC14947
MLOC_18367.3	346	2e-172	1 - 346	98	346 / 353	None	ABC14947
MLOC_7606.1	508	1e-169	1 - 480	89	447 / 503	None	ABC14947
MLOC_18367.4	1484	5e-164	248 - 560	100	313 / 313	CUST_4620_PI390587928	ABC14947
MLOC_18367.1	1354	2e-163	1043 - 1354	100	312 / 312	None	ABC14947
AK364477	3654	6e-79	226 - 415	95	181 / 190	None	ABC14947
MLOC_18367.2	296	1e-121	1 - 255	97	255 / 262	None	ABC14947
MLOC_7606.2	761	1e-61	1 - 144	97	139 / 144	None	ABC14947